PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sme2.5_00729.1_g00002.1
Organism
Solanum melongena
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Family BES1
Protein Properties Length: 246aa    MW: 26754.3 Da    PI: 8.675
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sme2.5_00729.1_g00002.1genomeEGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822163.91e-50285184
                   DUF822  1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaags 84
                             ++++r+ptwkErEnnkrRERrRRaiaaki+aGLR++Gny+lpk++DnneVlkALc+eAGw+ve+DGttyrk   p++   ++ +
  Sme2.5_00729.1_g00002.1  2 TSGTRMPTWKERENNKRRERRRRAIAAKIFAGLRMYGNYQLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKLPPPNSLIFHIHT 85
                             5899******************************************************************98777733333333 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056878.4E-493105IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    Send to blast
MTSGTRMPTW KERENNKRRE RRRRAIAAKI FAGLRMYGNY QLPKHCDNNE VLKALCNEAG  60
WTVEPDGTTY RKLPPPNSLI FHIHTGSISA PVTPPFSSPT ARTPRIKTDA GWAGFRYPYL  120
PSSTPASPGR QNFIGAECFA GISGPPSPTY SLVSPNPFGF KMDGLSRGGS RMCTPGQSGT  180
CSPAVAAGLD HNADVPMAEV MISDEFAFGS NAAGMVKPWE GERIHEDCVP DDLELTLGSS  240
KTRFVC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A6e-20672372438Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B6e-20672372438Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C6e-20672372438Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D6e-20672372438Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754460.0HG975446.1 Solanum pennellii chromosome ch07, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004244287.11e-112BES1/BZR1 homolog protein 4
RefseqXP_015080953.11e-112BES1/BZR1 homolog protein 4
SwissprotO494047e-63BEH3_ARATH; BES1/BZR1 homolog protein 3
TrEMBLA0A0V0HD291e-113A0A0V0HD29_SOLCH; Putative BES1/BZR1otein 4-like
STRINGSolyc07g062260.2.11e-111(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19842464
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18890.14e-64BES1/BZR1 homolog 3