PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sme2.5_00834.1_g00005.1
Organism
Solanum melongena
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Family bZIP
Protein Properties Length: 303aa    MW: 34709.8 Da    PI: 5.8932
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sme2.5_00834.1_g00005.1genomeEGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.22.3e-10177218546
                              CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                   bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                              kr +r   NR +A+rsR RK +++ eLe+ v +L+ae + L 
  Sme2.5_00834.1_g00005.1 177 KRIKRILANRQSAQRSRVRKMQYVSELERSVSTLQAEVSLLS 218
                              899*********************************987665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.0E-14173237IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.703175227IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.17E-11177231No hitNo description
Gene3DG3DSA:1.20.5.1701.4E-12177228No hitNo description
PfamPF001705.0E-9177219IPR004827Basic-leucine zipper domain
CDDcd147033.25E-21178228No hitNo description
PROSITE patternPS000360180195IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MAHLPPRAPN MAPNWLDFSL HQKMENIAPS THNLWADELL DMSSRRGSHR RSMSDSIAFL  60
ESPMVEECRR LSSTTPGSGG TTNEEFERFD DEQHIMSMFN DDVHDMSCSN PSSPSDYINI  120
NEDKKMNGPD EMMQQLKSDQ NEEVESSCKT NEELAKANQN ARTNNNEYSS ERVVDPKRIK  180
RILANRQSAQ RSRVRKMQYV SELERSVSTL QAEVSLLSPR VAFLDHQRLL LNVDNSALRQ  240
KIAALAQDKL FKDAHQEALK LEIERLRQIY YQQNMKKQMD NNTTPLADST NAPPDIKVQL  300
SVN
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754510.0HG975451.1 Solanum pennellii chromosome ch12, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015059519.10.0basic leucine zipper 34-like
SwissprotQ9M2K46e-93BZP61_ARATH; Basic leucine zipper 61
TrEMBLM1AD360.0M1AD36_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000202060.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA17752465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.15e-81bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]