PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sme2.5_01218.1_g00005.1
Organism
Solanum melongena
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Family bZIP
Protein Properties Length: 414aa    MW: 44820 Da    PI: 10.1765
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sme2.5_01218.1_g00005.1genomeEGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_142.91.1e-13336393561
                              CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHH CS
                   bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke.leelkkevaklks 61 
                              +r rr++kNRe+A rsR+RK+a++ eLe +v++L++ N++L+k+ ++ ++k+  +l +
  Sme2.5_01218.1_g00005.1 336 RRRRRMIKNRESAARSRARKQAYTLELEAEVAKLKEINEELRKKqADIIEKQKNQLLD 393
                              689**************************************97525666666666655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.7E-12332397IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.749334383IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.38E-10336382No hitNo description
Gene3DG3DSA:1.20.5.1705.3E-13336386No hitNo description
PfamPF001709.1E-12336394IPR004827Basic-leucine zipper domain
PROSITE patternPS000360339354IPR004827Basic-leucine zipper domain
CDDcd147077.87E-22341390No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0009738Biological Processabscisic acid-activated signaling pathway
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0000976Molecular Functiontranscription regulatory region sequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 414 aa     Download sequence    Send to blast
MGSYMNFKNI ADMPQLESNG GKSMGNGDFP LARQSSIYSL TFDELQTTFS GLGKDFGSIN  60
MEELLKSIWT AEESQALASS TSGGGDGNAP VGNLQRQGSL TLPRTLSQKT VDEVWRNFQK  120
ETTVSTKDGG DTGKSSFGQR QSTLGEMTLE EFLVKAGVVR EDMQSTSNSS SITFDNGLSQ  180
QNNNNGLNIA FQQQTQNTGL LINQVAANNM LNVVGATASQ QQPPQQQQPL FPKQTTVAFA  240
SPMQLSNNGH LASPRTRAPA VGMSSPSVNT NISQGGVVGM AGFHNGVSPS KGGSPGNDFA  300
ARSNVDTSSL SPSPYAFSEG GRGRRSGSSL EKVVERRRRR MIKNRESAAR SRARKQAYTL  360
ELEAEVAKLK EINEELRKKQ ADIIEKQKNQ LLDKSSMPCG YKLRCLRRTL TGPW
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00038PBMTransfer from AT4G34000Download
Motif logo
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF4422680.0KF442268.1 Solanum nigrum abscisic acid-insensitive 5-like protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015083782.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 4 isoform X2
RefseqXP_027774825.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 4 isoform X1
TrEMBLV5L0710.0V5L071_SOLNI; Abscisic acid-insensitive 5-like protein
STRINGSolyc01g108080.2.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7762497
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49720.12e-81abscisic acid responsive element-binding factor 1