PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sme2.5_01622.1_g00005.1

Organism

Solanum melongena

Taxonomic ID

4111

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum

Family

bZIP

Protein Properties

Length: 172aa MW: 19661.5 Da PI: 8.2031

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sme2.5_01622.1_g00005.1	genome	EGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	34.7	4e-11	50	87	3	40
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLea 40 +lk+ rr ++NR++A+rsR++ ++i+eLe+ v Le+ Sme2.5_01622.1_g00005.1 50 DLKKLRRTISNRLSAQRSRAKEAEYIAELEKQVNDLEN 87 79********************************9986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	2.2E-9	45	87	No hit	No description
SMART	SM00338	0.0013	48	112	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	9.3E-9	50	87	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	8.623	50	87	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	4.61E-8	51	89	No hit	No description
CDD	cd14703	4.26E-10	53	104	No hit	No description
PROSITE pattern	PS00036	0	55	70	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 172 aa Download sequence Send to blast
MDAKQKRFNE PDLELCLKTP TPEESNNRIP TLDEAVNFEL KHCQVDPNTD LKKLRRTISN 60 RLSAQRSRAK EAEYIAELEK QVNDLENIVA WRGSAVEIAK VNKNKMLLEN AMLHSQLDIL 120 TYKSNLSTAK TGELMFEIQR LKELAKAQKD KVPGMDVDQY LNFGAMPKNG NM

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_027773781.1	4e-60	transcription factor VIP1-like
TrEMBL	M1CZC9	2e-58	M1CZC9_SOLTU; Uncharacterized protein
STRING	PGSC0003DMT400078084	4e-59	(Solanum tuberosum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA7615	19	29

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58120.1	1e-08	bZIP family protein