PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sme2.5_01898.1_g00010.1
Organism
Solanum melongena
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Family ERF
Protein Properties Length: 190aa    MW: 21005.5 Da    PI: 9.7102
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sme2.5_01898.1_g00010.1genomeEGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP244.53.9e-141764253
                      AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53
                             +ykGVr  + +g++ A I+d s   +r+ ++lg+f+taeeAa+a++ a++++
  Sme2.5_01898.1_g00010.1 17 RYKGVRKLS-QGSYSAVIKDSS---QRRFVRLGTFDTAEEAARAYDTAARRY 64
                             59****877.9*********43...36**********************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.104.0E-181774IPR001471AP2/ERF domain
SuperFamilySSF541711.18E-141775IPR016177DNA-binding domain
CDDcd000182.19E-181776No hitNo description
PROSITE profilePS5103215.831774IPR001471AP2/ERF domain
PfamPF008471.6E-71764IPR001471AP2/ERF domain
SMARTSM003801.6E-171780IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    Send to blast
MTPKINNNAV VSSNEIRYKG VRKLSQGSYS AVIKDSSQRR FVRLGTFDTA EEAARAYDTA  60
ARRYLHPKTI INFPPATDHD NVKRTINYLS KLNGRNTINI DSNNNIGSSS RSGDDVVTFP  120
MPNQNPDHEF RRFTTITGAS VVMSMVRDKN LVEGLMREGL LFPNSEIAAN DGNSSEPLNL  180
ELSLAPPGSM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015161234.11e-62PREDICTED: ethylene-responsive transcription factor ERF096-like
TrEMBLM1C9G23e-61M1C9G2_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000627215e-62(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1848844