PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sme2.5_02238.1_g00002.1
Organism
Solanum melongena
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Family SAP
Protein Properties Length: 428aa    MW: 47284.1 Da    PI: 6.6537
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sme2.5_02238.1_g00002.1genomeEGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP618.31.7e-188742825454
                      SAP  25 ssgesegpsss.rqraanevwpePflealatqvaidasrslGrlaaasalanvfqvcstwravsrsdllwqrltrriWrrtkllrd 109
                              +s+e +++s++ r+r +n+vwpePfleala+q+aidas+s+G+laaa+al n+fqvcstwravsrsdllwq+l++riW+r +l+r 
  Sme2.5_02238.1_g00002.1   7 ASEEGGSSSRTrRSRGSNGVWPEPFLEALAIQMAIDASTSTGHLAAAQALSNLFQVCSTWRAVSRSDLLWQNLSNRIWSRRHLVRP 92 
                              3344444444415679********************************************************************** PP

                      SAP 110 tWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaaGfadGavrlfdletrlhvstflpqhrdrlG 195
                              tW++ey+y+h+t++nf +rry y tl+f p+++d+ n +d+lsCr+lalsd++laaGf+dG+v+lf+l tr+h+stf+pq+rdrlG
  Sme2.5_02238.1_g00002.1  93 TWHDEYVYWHQTSNNFLHRRYVYRTLHFVPPNNDD-NLNDNLSCRRLALSDNHLAAGFSDGSVQLFHLPTRVHLSTFHPQQRDRLG 177
                              ******************************96665.677*********************************************** PP

                      SAP 196 rfsravsGivisdsrlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWwvGlyaGvpGrafhiWdaeteelvf 281
                              r+sra+sGi++sd +lvfa+ldGdihv vi ga +a +rr++lGdvvndGalvdf+G+          vpGrafh+W +e ee++f
  Sme2.5_02238.1_g00002.1 178 RYSRAISGIILSDEKLVFASLDGDIHVVVIGGAEQAIPRRVHLGDVVNDGALVDFTGC----------VPGRAFHVWSSEMEEQIF 253
                              *********************************************************8..........8***************** PP

                      SAP 282 vGGsltdPeavmGWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeer.rGlivssldasneayvvvdsrGva 366
                              v G ltdPeav+GWh+ltelt+lvGr rvt r+ avaCt lr+vv+dl nqg++l+e++++   liv+s+da+++++++vd rG+a
  Sme2.5_02238.1_g00002.1 254 VVGDLTDPEAVTGWHLLTELTDLVGRARVTARDNAVACTGLRIVVIDLGNQGLILQERSFQqDQLIVGSFDATSDSLLAVDGRGIA 339
                              *********************************************************9988689********************** PP

                      SAP 367 tvrrvenleevcrfrvrg.aqrgvlgCvn.ggyalvyaggvlrvWeiekkegylyslrervgevnalvaddrhvavsssdgtihll 450
                              tvr++enl+e c f+v g +qrgv+g +n  gy++++ ggv+rvW++e+ + yly lrer+gev+a+ a++rh+ ++ssdgtihl+
  Sme2.5_02238.1_g00002.1 340 TVRQIENLDESCGFNVPGaSQRGVVGSLNnSGYGVMCVGGVIRVWKVENGV-YLYRLRERIGEVKAMHANERHIVACSSDGTIHLW 424
                              *****************99*******996369*****************88.********************************** PP

                      SAP 451 dfga 454
                              dfga
  Sme2.5_02238.1_g00002.1 425 DFGA 428
                              **97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.1280.508.8E-553105No hitNo description
SuperFamilySSF813837.63E-655127IPR001810F-box domain
SuperFamilySSF509785.68E-16131260IPR017986WD40-repeat-containing domain
Gene3DG3DSA:2.130.10.103.2E-13138257IPR015943WD40/YVTN repeat-like-containing domain
SuperFamilySSF509785.68E-16295426IPR017986WD40-repeat-containing domain
Gene3DG3DSA:2.130.10.103.2E-13335336IPR015943WD40/YVTN repeat-like-containing domain
Gene3DG3DSA:2.130.10.103.2E-13379426IPR015943WD40/YVTN repeat-like-containing domain
PROSITE profilePS5029410.127379428IPR017986WD40-repeat-containing domain
PROSITE profilePS500829.005408428IPR001680WD40 repeat
PROSITE patternPS006780412426IPR019775WD40 repeat, conserved site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 428 aa     Download sequence    Send to blast
MSSSTSASEE GGSSSRTRRS RGSNGVWPEP FLEALAIQMA IDASTSTGHL AAAQALSNLF  60
QVCSTWRAVS RSDLLWQNLS NRIWSRRHLV RPTWHDEYVY WHQTSNNFLH RRYVYRTLHF  120
VPPNNDDNLN DNLSCRRLAL SDNHLAAGFS DGSVQLFHLP TRVHLSTFHP QQRDRLGRYS  180
RAISGIILSD EKLVFASLDG DIHVVVIGGA EQAIPRRVHL GDVVNDGALV DFTGCVPGRA  240
FHVWSSEMEE QIFVVGDLTD PEAVTGWHLL TELTDLVGRA RVTARDNAVA CTGLRIVVID  300
LGNQGLILQE RSFQQDQLIV GSFDATSDSL LAVDGRGIAT VRQIENLDES CGFNVPGASQ  360
RGVVGSLNNS GYGVMCVGGV IRVWKVENGV YLYRLRERIG EVKAMHANER HIVACSSDGT  420
IHLWDFGA
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006357691.10.0PREDICTED: transcriptional regulator STERILE APETALA-like
SwissprotQ9FKH11e-151SAP_ARATH; Transcriptional regulator STERILE APETALA
TrEMBLA0A1S4B7T40.0A0A1S4B7T4_TOBAC; transcriptional regulator STERILE APETALA-like
TrEMBLA0A1U7YNT00.0A0A1U7YNT0_NICSY; transcriptional regulator STERILE APETALA-like
STRINGXP_009608214.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40992345
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.11e-147SAP family protein
Publications ? help Back to Top
  1. Li N, et al.
    STERILE APETALA modulates the stability of a repressor protein complex to control organ size in Arabidopsis thaliana.
    PLoS Genet., 2018. 14(2): p. e1007218
    [PMID:29401459]