PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sme2.5_02555.1_g00008.1
Organism
Solanum melongena
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Family EIL
Protein Properties Length: 421aa    MW: 48868.7 Da    PI: 6.6526
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sme2.5_02555.1_g00008.1genomeEGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN33113.6e-95312541229
                              XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                     EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpveg 86 
                              ++lkkrmwkd+++l++lk +++++++d  +  + +++ k +eq+rrkk+sraQD+iLkYM+k+mevc  qGfvYgi+ ekgk+ +g
  Sme2.5_02555.1_g00008.1  31 DDLKKRMWKDRIKLQKLKAKRESSCKDPVH-ESDETQAKQEEQSRRKKISRAQDSILKYMVKIMEVCHGQGFVYGIVGEKGKLFSG 115
                              79***********************88888.45556899*********************************************** PP

                              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH CS
                     EIN3  87 asdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPW 172
                              +sdsLr+WW+ekv+f++ +paai++    +l+ ++      + ss  h l++l D tl+ LLs+lmqhc+ppqr fple+g++pPW
  Sme2.5_02555.1_g00008.1 116 SSDSLREWWREKVRFEQSAPAAIADF-LPKLVEDN-VI--LDTSSHIHLLEDLRDGTLSTLLSTLMQHCEPPQRIFPLERGLAPPW 197
                              *************************9.44566442.22..35799***************************************** PP

                              ---S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTT CS
                     EIN3 173 WPtGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeireler 229
                              WPtGkelwwg +g++++qg+ppy+kphdlkkawk++vL+a ik m p+++++r+ + 
  Sme2.5_02555.1_g00008.1 198 WPTGKELWWGDQGIAQEQGPPPYRKPHDLKKAWKITVLAAIIKNMTPNLDRMRRKKK 254
                              *****************************************************9865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048734.0E-9731256No hitNo description
Gene3DG3DSA:1.10.3180.101.1E-46155253IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167685.89E-43158253IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 421 aa     Download sequence    Send to blast
MVEFDDIVEP SNDPMKELLE FGDGEENISY DDLKKRMWKD RIKLQKLKAK RESSCKDPVH  60
ESDETQAKQE EQSRRKKISR AQDSILKYMV KIMEVCHGQG FVYGIVGEKG KLFSGSSDSL  120
REWWREKVRF EQSAPAAIAD FLPKLVEDNV ILDTSSHIHL LEDLRDGTLS TLLSTLMQHC  180
EPPQRIFPLE RGLAPPWWPT GKELWWGDQG IAQEQGPPPY RKPHDLKKAW KITVLAAIIK  240
NMTPNLDRMR RKKKIKENLP LVPKNVFVDG SALRRKHKRK YNFERDITKE DVLYPCQNMN  300
CPHCELGFEF EDKNSRIPYG ENGGLNDKEN IDQVNLLVEA QTLPHEEWIA KVEEISPHDW  360
MNMEIQRSFS NYHAQFTACS GIQKNFESYS GEDVLEHLLS YGSMNINQKP LLFGNLSRKI  420
D
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A1e-37156251196Protein ETHYLENE INSENSITIVE 3
4zds_B1e-37156251196Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1273279RRKHKRK
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754420.0HG975442.1 Solanum pennellii chromosome ch03, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015162960.10.0PREDICTED: putative ETHYLENE INSENSITIVE 3-like 4 protein
SwissprotQ9LX162e-95EIL4_ARATH; Putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLA0A3Q7FMU20.0A0A3Q7FMU2_SOLLC; Uncharacterized protein
STRINGSolyc03g096630.1.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30423178
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10120.18e-98EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Jeong HJ,Choi JY,Shin HY,Bae JM,Shin JS
    Seed-specific expression of seven Arabidopsis promoters.
    Gene, 2014. 553(1): p. 17-23
    [PMID:25261846]