PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sme2.5_04709.1_g00002.1
Organism
Solanum melongena
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Family bZIP
Protein Properties Length: 295aa    MW: 32019.9 Da    PI: 6.5408
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sme2.5_04709.1_g00002.1genomeEGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.37.8e-14214268458
                              XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                   bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 
                               +++rr++kNRe+A rsR+RK+a++ eLe  v +Le+eN +L  e ee +ke  k
  Sme2.5_04709.1_g00002.1 214 QQKQRRMIKNRESAARSRERKQAYTVELESLVTQLEEENARLLREEEEKNKERLK 268
                              589**************************************99888777776554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.1E-13209273No hitNo description
SMARTSM003389.4E-10211275IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.116213265IPR004827Basic-leucine zipper domain
PfamPF001702.5E-12214266IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.69E-10215266No hitNo description
CDDcd147072.66E-21215255No hitNo description
PROSITE patternPS000360218233IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    Send to blast
MASKVMPSAS RTPNSDRSLH TQNPTSSSLH HSRDFDSMNM DEILKNIYSD SDPFACSVSD  60
TPATAAAAAP TPPSTAGGSG EMGCTKTVDE VWGEIVARGG GGSREPEEMT LEDFLTKAGA  120
VTEEDVRVPM IAPPPPPPPP ATAAPTARGF VVDNIMGTQF PVAMQNGPGG YGMETQSHMG  180
FGNGALAITG SGSGSGRGKR RSTVEELPAD RATQQKQRRM IKNRESAARS RERKQAYTVE  240
LESLVTQLEE ENARLLREEE EKNKERLKQI MENLIPVVEK RRPPRVLRRV QSMSW
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754401e-165HG975440.1 Solanum pennellii chromosome ch01, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004230595.11e-133bZIP transcription factor 12 isoform X2
TrEMBLA0A3Q7EQU81e-130A0A3Q7EQU8_SOLLC; Uncharacterized protein
STRINGSolyc01g104650.2.11e-131(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA27712452
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.14e-29bZIP family protein