PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sme2.5_04736.1_g00007.1
Organism
Solanum melongena
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Family ERF
Protein Properties Length: 199aa    MW: 21805.4 Da    PI: 4.7274
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sme2.5_04736.1_g00007.1genomeEGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.41.3e-163383255
                      AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                              y+G r++k++g+Wv+eIr+p+    +  r++lg+f t+e+Aa a++ a+ +l+g
  Sme2.5_04736.1_g00007.1 33 IYRGTRRRKSSGKWVSEIREPR----StNRIWLGTFPTPEMAAVAYDVAAIALKG 83
                             69******************84....259**********************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.1E-103283IPR001471AP2/ERF domain
CDDcd000181.04E-273293No hitNo description
PROSITE profilePS5103222.0623391IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.0E-273392IPR001471AP2/ERF domain
SMARTSM003803.1E-323397IPR001471AP2/ERF domain
SuperFamilySSF541711.18E-193392IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
MATYGGKDNI IGGSNDSDTT VPDNKNYSGR HPIYRGTRRR KSSGKWVSEI REPRSTNRIW  60
LGTFPTPEMA AVAYDVAAIA LKGPDADLNF PNLASSLPVP ATRSARDIQT AASGAATVVG  120
AAGDALLAVA CREGVVSERG KMENLEIQNY EFMDEDLIFD MPNVLVNMAE GMLISPPRFY  180
MHDDDDHTTI AYQNLWNYT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13641TRRRKS
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015086838.11e-107ethylene-responsive transcription factor ERF024-like
SwissprotQ9SJR02e-52ERF24_ARATH; Ethylene-responsive transcription factor ERF024
TrEMBLA0A3Q7HZ491e-104A0A3Q7HZ49_SOLLC; Uncharacterized protein
STRINGSolyc09g009240.1.11e-105(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA55322110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.16e-44ERF family protein