PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sme2.5_05422.1_g00004.1
Organism
Solanum melongena
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Family bZIP
Protein Properties Length: 338aa    MW: 38384.2 Da    PI: 7.9587
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sme2.5_05422.1_g00004.1genomeEGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_125.23.6e-082012421556
                              HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                   bZIP_1  15 eAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                               +A rsR RK++ i+eLe+ v+ L+ae ++L  ele l ++ 
  Sme2.5_05422.1_g00004.1 201 QSAHRSRVRKLQHIAELERTVQPLQAEGSELSAELEFLDQQN 242
                              69**********************************998876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.7E-5192251IPR004827Basic-leucine zipper domain
CDDcd147039.09E-14192243No hitNo description
SuperFamilySSF579596.14E-7201245No hitNo description
Gene3DG3DSA:1.20.5.1701.3E-8201245No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    Send to blast
MESSNGSSNL ENFSFANKQS ILDTTSPFLQ SYVVDSNMDV SKGKAKPAEG SSHHHRCNSE  60
SFLIEEQPSW LDELLNEPPE VTTVVPKGHR RSTSDTFAYL GAAAERLNTW EESKNRNVNV  120
GASWGSVNYA SYKDLSAVSF DTKPNSSHEQ KFNKESNGAP SVSHEKHNMR EKNQEGSSER  180
SNNAQAKHSM SKADAKRAKQ QSAHRSRVRK LQHIAELERT VQPLQAEGSE LSAELEFLDQ  240
QNIILSMENR ALRQRLDSLS QEQLIKHLEQ EMLERELTRL QTVYQMQRQQ QHQQPQQQNH  300
SKHRRNKSRD LEGQFANLSI KNDEASSSRV QATGSVRM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754501e-165HG975450.1 Solanum pennellii chromosome ch11, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006350327.10.0PREDICTED: uncharacterized protein At4g06598-like
TrEMBLM1AJA30.0M1AJA3_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000240030.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA114452023
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.26e-57bZIP family protein