PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sme2.5_06085.1_g00007.1
Organism
Solanum melongena
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Family GeBP
Protein Properties Length: 402aa    MW: 44935.1 Da    PI: 5.4012
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sme2.5_06085.1_g00007.1genomeEGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573107.21.2e-33160251397
                   DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqki 88 
                              +++lws+eD+++lL+G+ ++ka++g++p +d++af+ef+k++++++vsksql++K+rrLKkKf ++vk+   g++p+fsk +d  +
  Sme2.5_06085.1_g00007.1 160 PRSLWSDEDQLALLKGMAEYKAQKGMEPNADMSAFHEFIKGKLHVEVSKSQLSDKLRRLKKKFLTHVKD---GEDPVFSKGQDFLV 242
                              6789***************************************************************99...************** PP

                   DUF573  89 felskkiWg 97 
                              fe+sk+iWg
  Sme2.5_06085.1_g00007.1 243 FEHSKRIWG 251
                              ********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045042.2E-27162251IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    Send to blast
MAPKSKSRLV DQPPSASSSE EQEQVEESQE EEEEEESREE EREEESEEET EEEEEEPKTA  60
PPVEKRPITQ KPVQTPQKPQ PSSESGSEDG SGSESESESA HSLPSPSASD FTVKPSVPAK  120
AAAPSKPAAK RPQETQKEKD SRRKKPKIVE EEEKKAAATP RSLWSDEDQL ALLKGMAEYK  180
AQKGMEPNAD MSAFHEFIKG KLHVEVSKSQ LSDKLRRLKK KFLTHVKDGE DPVFSKGQDF  240
LVFEHSKRIW GAPGTSNGVK ENVDNSTNGK AKKPVEVKKS SEPKKSAKVS KPKDDEKRKE  300
EEKQVAVKEV VKEDTVKGDQ QDFHSKYPRL AASIESMSGM STLHPNGASF LKEKMSLIAG  360
DKAKVLEDKW KKLEDDEAAL MVKRLYLIAE HYRLVVDAMR GN
Functional Description ? help Back to Top
Source Description
UniProtMay act as a transcriptional regulator. Binds specifically to the B-box motif, a promoter element that is required for the tuber-specific and sucrose inducible expression of the patatin gene. {ECO:0000269|PubMed:12028578}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001305529.10.0STOREKEEPER protein
SwissprotQ94IK20.0STK_SOLTU; STOREKEEPER protein
TrEMBLA0A0V0ILV00.0A0A0V0ILV0_SOLCH; Putative neurofilament heavy polypeptide-like
STRINGSolyc07g052760.1.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA23692041
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.11e-22DNA-binding storekeeper protein-related transcriptional regulator