PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sme2.5_08138.1_g00002.1
Organism
Solanum melongena
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Family BES1
Protein Properties Length: 181aa    MW: 20844.7 Da    PI: 7.9863
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sme2.5_08138.1_g00002.1genomeEGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822122.55.8e-3836108476
                   DUF822   4 grkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl 76 
                               r p+ +Er +nk+RE +RR ia ki+aGLRa+Gnyklpk+aD n+ l ALc+eAGw ve+DGt yrk   ++
  Sme2.5_08138.1_g00002.1  36 FRYPSDRERQKNKQREQKRRSIAHKIFAGLRAHGNYKLPKHADTNDLLMALCKEAGWYVEEDGTIYRKDLVKM 108
                              5899***************************************************************988777 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056872.6E-3437107IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    Send to blast
MVKDKKISGV RGCIKTSRGP WLVHRTAKDG SVMTRFRYPS DRERQKNKQR EQKRRSIAHK  60
IFAGLRAHGN YKLPKHADTN DLLMALCKEA GWYVEEDGTI YRKDLVKMSR LIDVDSAYVS  120
MDDQTKEGDY CKCEDQIKYG EHYCECEVNM NNVEDEKGRP EESLTPSAEV CDVNLTLTLS  180
C
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A6e-1537103372438Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B6e-1537103372438Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C6e-1537103372438Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D6e-1537103372438Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754491e-103HG975449.1 Solanum pennellii chromosome ch10, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010327721.11e-107protein BRASSINAZOLE-RESISTANT 2-like
TrEMBLM1DMZ21e-107M1DMZ2_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000915921e-108(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA62042130
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50750.15e-19BES1/BZR1 homolog 1