PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sme2.5_10536.1_g00002.1
Organism
Solanum melongena
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Family bZIP
Protein Properties Length: 187aa    MW: 21587.3 Da    PI: 8.6446
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sme2.5_10536.1_g00002.1genomeEGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_142.51.4e-1369128362
                              XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                   bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                              + k+ +r+++NRe+ArrsR RK+  +e+L++++  L+ eN++L +++ + + +++ ++ e
  Sme2.5_10536.1_g00002.1  69 DEKKRKRMISNRESARRSRMRKQTHLENLRDESNRLKVENRDLTNRVRSVTGHCQLVERE 128
                              56999*******************************************999999976665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.3E-1261123No hitNo description
SMARTSM003386.6E-1567131IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.43869139IPR004827Basic-leucine zipper domain
PfamPF001703.4E-1171126IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.11E-1171123No hitNo description
CDDcd147028.64E-1772123No hitNo description
PROSITE patternPS0003607489IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    Send to blast
MLSTILSSDG LFPKPVSSFY EWDWAFTCPD EQGAESILQS PTLEPVISGS GSDKSKPDSP  60
NDSPNSGSDE KKRKRMISNR ESARRSRMRK QTHLENLRDE SNRLKVENRD LTNRVRSVTG  120
HCQLVERENQ MLRTELILLR QRLEGISEIL KAKQLQQQLC NSHAWPCNNL YVEQRPYIIN  180
QPIINHQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18390RRSRMRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006362088.13e-89PREDICTED: bZIP transcription factor 53-like
TrEMBLM1A3K47e-88M1A3K4_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000139721e-88(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA28202251
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22850.21e-21basic leucine-zipper 6