PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sme2.5_11459.1_g00002.1

Organism

Solanum melongena

Taxonomic ID

4111

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum

Family

GeBP

Protein Properties

Length: 115aa MW: 13618.5 Da PI: 7.6763

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sme2.5_11459.1_g00002.1	genome	EGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	30.4	1.1e-09	42	112	26	97
DUF573 26 tgkspsddidafyefvkksi.sfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 t ++ ++ f+k+s+ ++k+s ++l eKi L k+f + +++ +g++p+++++ d++if+ls ++Wg Sme2.5_11459.1_g00002.1 42 TWNALQSSFNNQLIFIKNSLpDLKISIEDLEEKITALGKRFIDVREQ--HGDDPEMAQTIDREIFNLSIRLWG 112 444444466667778888884589********************9..*********************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	7.4E-7	19	112	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 115 aa Download sequence Send to blast
MPRRDMHRNH VDPTYDHEAL LEGFISSAKR KVRTISDYKC ITWNALQSSF NNQLIFIKNS 60 LPDLKISIED LEEKITALGK RFIDVREQHG DDPEMAQTID REIFNLSIRL WGRRY

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	M1DMN8	2e-26	M1DMN8_SOLTU; Uncharacterized protein
STRING	PGSC0003DMT400091462	3e-27	(Solanum tuberosum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA17221	5	5