PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sme2.5_12232.1_g00002.1
Organism
Solanum melongena
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Family bZIP
Protein Properties Length: 442aa    MW: 47483.4 Da    PI: 9.9742
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sme2.5_12232.1_g00002.1genomeEGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.73.4e-15364415556
                              CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                   bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                              +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++eN++L+k+ ee+ ++ 
  Sme2.5_12232.1_g00002.1 364 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENEELQKKQEEMLEMQ 415
                              79***************************************98887766654 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.9E-14360425IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.542362411IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1708.0E-15364413No hitNo description
PfamPF001704.2E-13364416IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.52E-11364413No hitNo description
CDDcd147071.50E-29364418No hitNo description
PROSITE patternPS000360367382IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0009738Biological Processabscisic acid-activated signaling pathway
GO:0010255Biological Processglucose mediated signaling pathway
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0000976Molecular Functiontranscription regulatory region sequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 442 aa     Download sequence    Send to blast
MGSNIHFKNF GNEPPGEGGS GGKQPGNFGL PRQPSIYSLT FDEFLSSTGG IGKDFGSMNM  60
DELLKNIWSA EEGQTIGGSG INGQEVGVPG GHLQRQGSLT LPRTLSQKTV DEVWRDMTKE  120
QGGGKDGNSV GLPPNIPQRQ QTLGNITLEE FLVRAGVVRE DAQLAAKSSN AGIFADLAFG  180
GNNTGLALGH QQNNRNAGLM ADSIPNKNDE TVIQSANLPL NVNGVRSTQQ QLRPQQLQQN  240
QQQQQPQQQP IFPKQPALPY GAPMAIPNSG QLGSPGMRAG MVGIADQALG SNFIQGNSLM  300
GGGMNMVGLG AGGVTVATAS PGVSSSDGLG KSNGDTPSVS PVPYVFNGGL RGRKYSTVEK  360
VVERRQRRMI KNRESAARSR ARKQAYTMEL EAEVAKLKEE NEELQKKQEE MLEMQKNQVM  420
EMMNLQKGAK RRCLRRTQTG PW
Functional Description ? help Back to Top
Source Description
UniProtInvolved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00186DAPTransfer from AT1G45249Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269|PubMed:10636868, ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJN8120590.0JN812059.1 Solanum torvum ABA responsive element-binding protein (AREB) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001234596.10.0ABA-response element binding factor AREB1
RefseqXP_010320059.10.0AREB-like protein isoform X1
RefseqXP_025886215.10.0AREB-like protein isoform X1
SwissprotQ9M7Q41e-127AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBLH6V8U10.0H6V8U1_SOLTO; ABA responsive element-binding protein
STRINGSolyc04g078840.2.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7762497
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G45249.11e-93abscisic acid responsive elements-binding factor 2
Publications ? help Back to Top
  1. Gao S, et al.
    ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis.
    Mol Plant, 2016. 9(9): p. 1272-1285
    [PMID:27373216]
  2. Seok HY, et al.
    Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response.
    Planta, 2017. 245(2): p. 329-341
    [PMID:27770200]