PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sme2.5_14814.1_g00001.1
Organism
Solanum melongena
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Family MYB_related
Protein Properties Length: 88aa    MW: 10091.3 Da    PI: 5.0908
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sme2.5_14814.1_g00001.1genomeEGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.99.5e-08752447
                             S-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS
          Myb_DNA-binding  4 WTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47
                             WT eE++++ +a + +G +     W+   r    g+t+ ++k ++ k 
  Sme2.5_14814.1_g00001.1  7 WTWEEHKKFQNALAIYGIDetpgMWSYLVRVT--GKTEQEVKAHYKKI 52
                             ********************888888855555..69*********996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466894.45E-8659IPR009057Homeodomain-like
CDDcd001670.00152753No hitNo description
Gene3DG3DSA:1.10.10.605.2E-4750IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 88 aa     Download sequence    Send to blast
MASNLGWTWE EHKKFQNALA IYGIDETPGM WSYLVRVTGK TEQEVKAHYK KIMVGVVQIE  60
AGLISLPRDD EVSDGQNNNR QNDEQRLN
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G2VIC43e-34A0A2G2VIC4_CAPBA; Uncharacterized protein
STRINGPGSC0003DMT4000398855e-33(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1719922
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.21e-11RAD-like 6