PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sme2.5_15108.1_g00001.1

Organism

Solanum melongena

Taxonomic ID

4111

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum

Family

BES1

Protein Properties

Length: 210aa MW: 23317.6 Da PI: 11.6437

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sme2.5_15108.1_g00001.1	genome	EGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	42.7	2.2e-13	48	80	3	35
DUF822 3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRa 35 + rk+++kE+E++k+RER+RRai+++++aGLR+ Sme2.5_15108.1_g00001.1 48 KSRKEREKEKERTKLRERHRRAITSRMLAGLRQ 80 789*****************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	1.4E-12	48	108	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 210 aa Download sequence Send to blast
MSNPQFPNQN DDPNPNQPLQ PRSHPQPRRP RGFAATNAAA PAAGTTNKSR KEREKEKERT 60 KLRERHRRAI TSRMLAGLRQ FYLITPLTQK CSLAVNKVGK AMGCWGVEPL QRQGFRRRRL 120 SKGGTVGLNG PTSLASKSSK DIVYISTNRK WEIPVLTESS KHSARNCSPV TFLELRSFLL 180 SLFPALICSS DSNNNNVSSG EAMGTTRLGM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	114	119	FRRRRL

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HG975447	5e-81	HG975447.1 Solanum pennellii chromosome ch08, complete genome.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004244442.1	8e-23	beta-amylase 8 isoform X2
Refseq	XP_010324502.1	8e-23	beta-amylase 8 isoform X1
Refseq	XP_010324503.1	8e-23	beta-amylase 8 isoform X3
Refseq	XP_010324504.1	8e-23	beta-amylase 8 isoform X4
Refseq	XP_010324505.1	8e-23	beta-amylase 8 isoform X5
Refseq	XP_025888445.1	8e-23	beta-amylase 8 isoform X5
TrEMBL	A0A3Q7IDQ8	2e-21	A0A3Q7IDQ8_SOLLC; Beta-amylase
STRING	Solyc08g005780.2.1	3e-22	(Solanum lycopersicum)