PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sme2.5_16526.1_g00002.1
Organism
Solanum melongena
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Family BES1
Protein Properties Length: 159aa    MW: 17197.5 Da    PI: 10.0914
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sme2.5_16526.1_g00002.1genomeEGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822214.91.9e-6691531149
                   DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssa 86 
                              g+sgr ptwkErEnnkrRERrRRaiaaki++GLR qGn+klpk++DnneVlkALc eAGwvvedDGttyrkg++p+     + +s 
  Sme2.5_16526.1_g00002.1   9 GSSGRLPTWKERENNKRRERRRRAIAAKIFTGLRTQGNFKLPKHCDNNEVLKALCFEAGWVVEDDGTTYRKGQRPP-PIVNGCASM 93 
                              689*************************************************************************.88999999* PP

                   DUF822  87 saspesslqsslkssalaspvesysaspksssfpspssldsislasaasllpvlsvlslvsss 149
                              ++s +ss+q s+ ss+++spv+sy+asp+sssfpsps+ d ++    +++lp+l++l++++s+
  Sme2.5_16526.1_g00002.1  94 NISACSSIQPSPMSSSFPSPVPSYHASPTSSSFPSPSHCDGNPP---SHILPFLHNLASIPST 153
                              ****************************************9987...599****999998876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056875.8E-6210133IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    Send to blast
MTACAGGGGS SGRLPTWKER ENNKRRERRR RAIAAKIFTG LRTQGNFKLP KHCDNNEVLK  60
ALCFEAGWVV EDDGTTYRKG QRPPPIVNGC ASMNISACSS IQPSPMSSSF PSPVPSYHAS  120
PTSSSFPSPS HCDGNPPSHI LPFLHNLASI PSTLPPLRI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A1e-251385372444Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B1e-251385372444Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C1e-251385372444Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D1e-251385372444Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0135920.0BT013592.1 Lycopersicon esculentum clone 132355R, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016557829.15e-73PREDICTED: BES1/BZR1 homolog protein 2-like
SwissprotQ94A435e-45BEH2_ARATH; BES1/BZR1 homolog protein 2
TrEMBLA0A1U8FPZ61e-71A0A1U8FPZ6_CAPAN; BES1/BZR1 homolog protein 2-like
STRINGXP_009765795.12e-60(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA62042130
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36780.18e-33BES1/BZR1 homolog 2