PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sme2.5_20966.1_g00001.1

Organism

Solanum melongena

Taxonomic ID

4111

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum

Family

G2-like

Protein Properties

Length: 88aa MW: 10418.6 Da PI: 7.7841

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sme2.5_20966.1_g00001.1	genome	EGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	23	1.7e-07	67	86	3	22
G2-like 3 rlrWtpeLHerFveaveqLG 22 ++Wt++LH++F+++v+qLG Sme2.5_20966.1_g00001.1 67 YIKWTEDLHAKFMDVVHQLG 86 589****************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.6E-5	63	86	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 88 aa Download sequence Send to blast
MRSKKEREGL GNNNIVGEDE ESREEESNNI HEAENDIMLT GRYKPRKKRS RKSMKEINEG 60 ESRRKNYIKW TEDLHAKFMD VVHQLGEG

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015165596.1	8e-18	PREDICTED: putative two-component response regulator ARR13
TrEMBL	M1DU28	5e-17	M1DU28_SOLTU; Uncharacterized protein
STRING	PGSC0003DMT400094405	9e-18	(Solanum tuberosum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA813	23	84