 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Sof006956 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Saccharinae; Saccharum; Saccharum officinarum complex
|
| Family |
WRKY |
| Protein Properties |
Length: 351aa MW: 37563 Da PI: 10.7312 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PUT-157a-Saccharum_officinarum-85687 | PU_ref | plantGDB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 22.7 | 1.9e-07 | 332 | 350 | 2 | 20 |
--SS-EEEEEEE--TT-SS CS
WRKY 2 dDgynWrKYGqKevkgsef 20
+D+++W KYGqK++kgs++
Sof006956 332 SDEFSWEKYGQKPIKGSPH 350
69***************86 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 351 aa
Download sequence Send
to blast |
XELVVATPGE AGLRSAREGG MGPSMEGMEE ANRTAVQSCH RVLALLSNPP AKLSNSNGNG 60
LQLQGHARVR KIKKPLPIFD SNLFLESSAV AAAATVAKTP SPSPITGLQL FPRYHQMEGS 120
SSKDPIRIPA QFPKRLLLEN PAAGLEGPSS KAPPVQMVQP VSVAPPAGTP TPALPAAHLH 180
FLQQHQSYQR FQLMHQMKFQ NEMMKRNNLG DQGGSLSGGS GGGGKGVNLK FDSSNCTASS 240
SRSFLSSLSM EGSLVSLDRN RASRPFQLVS GSQTSSTPEL GLVHRRRCAG REDGSGRCTT 300
GSRCHCSXKR KLRDKRSIKV PAISNKVADI PSDEFSWEKY GQKPIKGSPH X
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: More abundant in apices and young leaf primordia than in fully expanded leaf tissues. {ECO:0000269|PubMed:16243907}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
