PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sof020510
Organism
Saccharum officinarum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Saccharinae; Saccharum; Saccharum officinarum complex
Family BES1
Protein Properties Length: 108aa    MW: 11789.1 Da    PI: 12.2822
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-157a-Saccharum_officinarum-72983PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822135.36.3e-4247108162
     DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvv 62 
                g++gr+ptw+ErEnnkrRERrRRaiaaki+aGLRa+G+yklpk++DnneVlkALc+eAGwvv
  Sof020510  47 GAAGRMPTWRERENNKRRERRRRAIAAKIFAGLRAHGGYKLPKHCDNNEVLKALCNEAGWVV 108
                689**********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.3E-3649108IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 108 aa     Download sequence    Send to blast
XRSLPTQTST RSGRSRVASS SLLEPSRAER GSRGRRMASG GGGGGLGAAG RMPTWREREN  60
NKRRERRRRA IAAKIFAGLR AHGGYKLPKH CDNNEVLKAL CNEAGWVV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A8e-1751108372429Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B8e-1751108372429Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C8e-1751108372429Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D8e-1751108372429Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Sof.111958e-41crown| inflorescence| meristem| root| stem
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010675300.16e-31PREDICTED: BES1/BZR1 homolog protein 4
SwissprotQ9S7F39e-25BEH1_ARATH; BES1/BZR1 homolog protein 1
TrEMBLB8A6K98e-34B8A6K9_ORYSI; Uncharacterized protein
TrEMBLB9ETZ28e-34B9ETZ2_ORYSJ; Uncharacterized protein
STRINGXP_010675300.12e-30(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.17e-17BES1/BZR1 homolog 4