PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sopen04g031190.1
Organism
Solanum pennellii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
Family bZIP
Protein Properties Length: 139aa    MW: 16614.7 Da    PI: 7.8446
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sopen04g031190.1genomespennView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_144.43.5e-1454111562
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                       ++ rrk++NRe+ArrsR+RKk  ie+ +e v  L+aeN++Lk++l     ++++ +se
  Sopen04g031190.1  54 RKRRRKISNRESARRSRLRKKNHIEKITEQVNRLKAENRDLKNQLWVAAHHCQAAQSE 111
                       6789**************************************9998888888876665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.1E-1250114IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1709.3E-115298No hitNo description
PROSITE profilePS5021711.1745298IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.62E-1054105No hitNo description
PfamPF001702.3E-1154107IPR004827Basic-leucine zipper domain
CDDcd147022.86E-1455106No hitNo description
PROSITE patternPS0003605772IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    Send to blast
MFDDPVHYHF PVLEDFFHSS NDFNDLFSLL ETEIPVQSTS GSETNRLVFL LEERKRRRKI  60
SNRESARRSR LRKKNHIEKI TEQVNRLKAE NRDLKNQLWV AAHHCQAAQS ETDRLRLESF  120
VLQQYLVELH ESLNSMQLH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15357RKRRR
26672RRSRLRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754430.0HG975443.1 Solanum pennellii chromosome ch04, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028065855.17e-39basic leucine zipper 4-like
TrEMBLM1A1G03e-82M1A1G0_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000125755e-83(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA28202251
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49760.12e-21basic leucine-zipper 5