PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sopen07g031850.1

Organism

Solanum pennellii

Taxonomic ID

28526

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon

Family

NZZ/SPL

Protein Properties

Length: 351aa MW: 38639 Da PI: 8.3725

Description

NZZ/SPL family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sopen07g031850.1	genome	spenn	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NOZZLE	22.8	1.6e-07	26	74	41	90
NOZZLE 41 ksrgrkpgsktaqqkqkkptlrgmgvaklerfiieeekkklvvatvgdts 90 + gr+ sk +q+k+k+p rgmgv +ler +++++ k+ ++ +v Sopen07g031850.1 26 STGGRRRSSKNGQKKKKQPQ-RGMGVEQLERLRVQDQIKNSTIHGVHHNH 74 456899*****9999995.*************99998877776555 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF08744	3.8E-5	24	73	IPR014855	Plant transcription factor NOZZLE

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence Send to blast
MATSLQFSSD HHPIPQENHQ TMNQTSTGGR RRSSKNGQKK KKQPQRGMGV EQLERLRVQD 60 QIKNSTIHGV HHNHQYYSNN NFPDLTPLSS FTGGGSASAD PGNYSNSILN SSPVLQFPKL 120 CAVSPNDFFM QQKVVNTGFI GSSSTNQLMI SSHDHHQFQS QMNLYGFATS KPSTEKSKEL 180 YPMPNLFSSN NSCFSDRCRS CNKKKRMING EEISIHMEDM IREKEDSGTK PLLHSYSLPS 240 HQQKGVEIVA IHRKGSSSAL SSDEGAVMME YDFFPEKISS KSTNTYKSCF EKEATMMSAY 300 NSPESSSFAA AAAAGNIING EASSVTTISW AADTTTTTPT SSIDLSLKLS C

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence Send to blast

MATSLQFSSD HHPIPQENHQ TMNQTSTGGR RRSSKNGQKK KKQPQRGMGV EQLERLRVQD  60
QIKNSTIHGV HHNHQYYSNN NFPDLTPLSS FTGGGSASAD PGNYSNSILN SSPVLQFPKL  120
CAVSPNDFFM QQKVVNTGFI GSSSTNQLMI SSHDHHQFQS QMNLYGFATS KPSTEKSKEL  180
YPMPNLFSSN NSCFSDRCRS CNKKKRMING EEISIHMEDM IREKEDSGTK PLLHSYSLPS  240
HQQKGVEIVA IHRKGSSSAL SSDEGAVMME YDFFPEKISS KSTNTYKSCF EKEATMMSAY  300
NSPESSSFAA AAAAGNIING EASSVTTISW AADTTTTTPT SSIDLSLKLS C

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HG975446	0.0	HG975446.1 Solanum pennellii chromosome ch07, complete genome.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_027773964.1	0.0	uncharacterized protein LOC114077851
TrEMBL	A0A1J0RE57	0.0	A0A1J0RE57_SOLLC; SPOROCYTELESS/NOOZLE-like protein
STRING	Solyc07g063670.2.1	0.0	(Solanum lycopersicum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA12499	7	8