PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sp_000070_yfgx.t1
Common NameSOVF_000070
Organism
Spinacia oleracea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
Family bZIP
Protein Properties Length: 292aa    MW: 33032.7 Da    PI: 7.8103
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sp_000070_yfgx.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_120.31.2e-06153205762
                        HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   7 errkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                        ++rkq N   ArrsR RK+++i+eLe+ +++L+a   +   +le l ++   l +e
  Sp_000070_yfgx.t1 153 AKRKQHN---ARRSRVRKLQYIAELERNAQVLQAAGAEVSAQLEFLDQQNLILGME 205
                        5788887...************************9999988888888877766666 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0099150208IPR004827Basic-leucine zipper domain
CDDcd147033.07E-12153199No hitNo description
Gene3DG3DSA:1.20.5.1708.4E-5160202No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    Send to blast
MSRCCSTDEE PPPWLDDLLN EPESPNNKAH RRSASDSFAY TDEVWLRTVI GAPYCTFQMP  60
RYSNGTPQPG SFSSNKSTSG NNKQQQDNKL GKLPSSSTCL SLPNDADCQA LGMSCSPEPD  120
RGVRLSGTEP ETEISTDCSH FKPPSTFNNN TDAKRKQHNA RRSRVRKLQY IAELERNAQV  180
LQAAGAEVSA QLEFLDQQNL ILGMENRALK QRLESLSQEH FIKSMEQEIL DKEVARLQYL  240
YQLQQNMSHH QQRQRQKQNH RRGRSYNDVD SQLSKLSLHP PKAVAATDTA LQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1154167RKQHNARRSRVRKL
2160166RRSRVRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021847908.10.0basic leucine zipper 34-like
TrEMBLA0A0K9S4240.0A0A0K9S424_SPIOL; Uncharacterized protein
STRINGXP_010681167.11e-110(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.27e-48bZIP family protein