PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sp_005440_jamk.t1
Common NameSOVF_005440
Organism
Spinacia oleracea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
Family EIL
Protein Properties Length: 616aa    MW: 68551.3 Da    PI: 5.935
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sp_005440_jamk.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3448.84.3e-137383781339
                        XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
               EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLr 92 
                        eel++rmwkd+++lkrlker+k +  ++  a++++k +++++qarrkkmsraQDgiLkYMlk mevc+a+GfvYgiipekgkpv+g+sd++r
  Sp_005440_jamk.t1  38 EELERRMWKDRIKLKRLKEREKIE--AQR-AAEKQKPKQTSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGSSDNIR 126
                        8*******************9964..455.599*********************************************************** PP

                        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHH CS
               EIN3  93 aWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgel 184
                        aWWkekv+fd+ngpaai+ky+a++l++s+++++   +   +++l++lqD+tlgSLLs+lmqhc+ppqr+fplekgv+pPWWP+G+e+ww++l
  Sp_005440_jamk.t1 127 AWWKEKVRFDKNGPAAIAKYEAECLAMSEGNGNGNGNGIGQNTLQDLQDATLGSLLSSLMQHCNPPQRKFPLEKGVPPPWWPSGNEDWWAKL 218
                        *********************************999******************************************************** PP

                        T--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX.........XX CS
               EIN3 185 glskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss.........sl 267
                        gl+k q+ ppykkphdlkk+wkv+vLtavikhmsp+i++ir+l+rqsk+lqdkm+akes ++l vl++ee+++++ s+++            
  Sp_005440_jamk.t1 219 GLPKGQS-PPYKKPHDLKKMWKVGVLTAVIKHMSPDIAKIRRLVRQSKCLQDKMTAKESSIWLGVLGREESLIRQPSSDNGnsgitgsppGP 309
                        *******.9**********************************************************************4445677777766 PP

                        XXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XX CS
               EIN3 268 rkqspkvtlsceqkedvegkkeskikhvqavkttagfpvvrkrkkkpsesakvsskevsrtcqssqfrgset 339
                        r +++k ++s+++++dv+g +e   + +++  + ag+pvv+kr    +++++v++++  r   ss+  ++++
  Sp_005440_jamk.t1 310 RGGKRKPNASSDSDYDVDGLDEGAGSVSSKMGEPAGEPVVNKRL-SIRNKSSVEKQSKRRRKASSS--DQQP 378
                        779***************9999999999999************8.555555555553323333322..2233 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048738.9E-12738287No hitNo description
Gene3DG3DSA:1.10.3180.108.0E-72167295IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167687.98E-62168290IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042762Biological Processregulation of sulfur metabolic process
GO:0071281Biological Processcellular response to iron ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 616 aa     Download sequence    Send to blast
MAELEEIGHD YGSDIEVDEL RCGNIAEKDV SDEEIDPEEL ERRMWKDRIK LKRLKEREKI  60
EAQRAAEKQK PKQTSDQARR KKMSRAQDGI LKYMLKLMEV CKARGFVYGI IPEKGKPVSG  120
SSDNIRAWWK EKVRFDKNGP AAIAKYEAEC LAMSEGNGNG NGNGIGQNTL QDLQDATLGS  180
LLSSLMQHCN PPQRKFPLEK GVPPPWWPSG NEDWWAKLGL PKGQSPPYKK PHDLKKMWKV  240
GVLTAVIKHM SPDIAKIRRL VRQSKCLQDK MTAKESSIWL GVLGREESLI RQPSSDNGNS  300
GITGSPPGPR GGKRKPNASS DSDYDVDGLD EGAGSVSSKM GEPAGEPVVN KRLSIRNKSS  360
VEKQSKRRRK ASSSDQQPNP STDGKQLATN DQQPAPSTNE NLVDETAGPG PGPEPRPGPV  420
VDHNNADLND FQMHDNQQEN DSIFIEPLLS LDNDILGQFS HFPNVRPPQL LSGHNMFVGG  480
QSYHHPSVQD PELQHRDSYY NPSIHQYGQR LDEHRLEHNT ISSEPQTRQE GVGMHLPSLN  540
TAENDINGGH LHHYGVVDAF QDKNRPFDSH LGSSFNGGLS IDFDLFDNTF PEIEGFGLED  600
DYLAGDDLDI LQYCGA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A1e-721672989140ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00233DAPTransfer from AT1G73730Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021863114.10.0ETHYLENE INSENSITIVE 3-like 3 protein
SwissprotO231161e-174EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLA0A0K9S1030.0A0A0K9S103_SPIOL; Uncharacterized protein
STRINGXP_010688276.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.11e-160ETHYLENE-INSENSITIVE3-like 3
Publications ? help Back to Top
  1. Frerigmann H,Gigolashvili T
    Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
    Front Plant Sci, 2014. 5: p. 626
    [PMID:25426131]
  2. Zheng ZL,Zhang B,Leustek T
    Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing.
    Front Plant Sci, 2014. 5: p. 710
    [PMID:25566284]
  3. Panda SK,Sunkar R
    Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling.
    Plant Signal Behav, 2015. 10(4): p. e1010916
    [PMID:25912823]
  4. Wawrzyńska A,Sirko A
    EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor.
    Plant Sci., 2016. 253: p. 50-57
    [PMID:27968996]