PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sp_008740_hruy.t1
Common NameSOVF_008740
Organism
Spinacia oleracea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
Family bZIP
Protein Properties Length: 167aa    MW: 18995.9 Da    PI: 8.0874
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sp_008740_hruy.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_142.11.9e-13118160547
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 
                        +r +r++kNRe+A rsR+R++a++ eLe++ ++L++eN +L+k
  Sp_008740_hruy.t1 118 RRHKRMMKNRESAARSRARRQAYTSELEREHAKLKEENAKLRK 160
                        699**************************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.2E-4113165IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.358116160IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.69E-9118161No hitNo description
Gene3DG3DSA:1.20.5.1703.4E-12118161No hitNo description
PfamPF001708.0E-12118160IPR004827Basic-leucine zipper domain
PROSITE patternPS000360121136IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    Send to blast
MEELCIGRQK SSFQSFVAPG SIPRINLNNV NNDENEKHVD VDEEDEDDGR NDMFNKTAGG  60
FISSLNSPFD QAIGNTSDAV SSCSLLNLNN NTTCFTSIKN KRVSEDHNIF NAESGVNRRH  120
KRMMKNRESA ARSRARRQAY TSELEREHAK LKEENAKLRK LQQRVSF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021866176.11e-118protein FD-like isoform X1
RefseqXP_021866177.11e-118protein FD-like isoform X2
RefseqXP_021866178.11e-118protein FD-like isoform X3
TrEMBLA0A0K9S1V91e-119A0A0K9S1V9_SPIOL; Uncharacterized protein
STRINGXP_010666911.12e-29(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G45249.11e-08abscisic acid responsive elements-binding factor 2