PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sp_021340_itnu.t1
Common NameSOVF_021340
Organism
Spinacia oleracea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
Family ERF
Protein Properties Length: 338aa    MW: 36296.6 Da    PI: 6.368
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sp_021340_itnu.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP237.17.7e-121156755
                AP2  7 rwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                       r++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  Sp_021340_itnu.t1 11 RRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 56
                       89**********988532...5************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103216.99564IPR001471AP2/ERF domain
PfamPF008476.5E-71156IPR001471AP2/ERF domain
SMARTSM003803.9E-261170IPR001471AP2/ERF domain
CDDcd000184.08E-211266No hitNo description
Gene3DG3DSA:3.30.730.102.2E-151264IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-151265IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    Send to blast
MTRQEYVASL RRHHQHGRWQ ARIGRVAGNK DLYLGTFSTQ EEAAEAYDIA AIKFRGLNAV  60
TNFEINRYDV KAILDSTTLP IGGAAKRLKD VEDLTTAPDK QIIRAIAAAE DHANSHQLIT  120
NNLYGSNNNG TPNFHSWPGI AFATPAAQPL AMHYPYATTT APHQQQQQQQ QRVWCKQEVE  180
DSSDYQDHLN QQLQLNSGTH NFFQMHNLMG LENNNSGVYG NGNGNESVGG GGGGVNGGGY  240
GLPFGMSTVI ANDGNGTGNE QQSGYENYYY FSNQGNANNA SSASVRGAVG TYDQGSACNN  300
WVPTAIPALV PRPSTMAAAA GGGHGGGSIP TFTVWNDT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021843262.10.0AP2-like ethylene-responsive transcription factor AIL1
TrEMBLA0A0K9RWF10.0A0A0K9RWF1_SPIOL; Uncharacterized protein
STRINGXP_010674006.11e-149(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51190.18e-45AP2 family protein