PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sp_026350_tdhu.t1
Common NameSOVF_026350
Organism
Spinacia oleracea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
Family bZIP
Protein Properties Length: 174aa    MW: 19162.4 Da    PI: 6.5395
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sp_026350_tdhu.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.32.2e-103480551
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51
                       ++ rr+ +NRe+ArrsR +K++ ++ L + +  L  +N++  k++ e
  Sp_026350_tdhu.t1 34 RKRRRRDSNRESARRSRIKKQEHLDGLLKQIGYLIRQNEEILKKIGE 80
                       57899**********************************99999876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.7E-133094IPR004827Basic-leucine zipper domain
PfamPF077164.3E-93178IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1709.4E-113179No hitNo description
PROSITE profilePS5021710.5653295IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.04E-103480No hitNo description
PROSITE patternPS0003603752IPR004827Basic-leucine zipper domain
CDDcd147021.23E-114181No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    Send to blast
MAASNNSSDD GITITVVSSG SSEGCSELPI DDERKRRRRD SNRESARRSR IKKQEHLDGL  60
LKQIGYLIRQ NEEILKKIGE IGVSLEVFES ENAVLRAMKN SLETRLVSLE SVIEIVKVVR  120
GGSTSSSSSA AGGGFNDDGV DNNNKNSSDP MMKPWQLPCP SMPITIHSFK DYNF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13337RKRRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021839987.11e-124bZIP transcription factor 53-like
RefseqXP_021853599.11e-124bZIP transcription factor 53-like
TrEMBLA0A0K9RUV91e-123A0A0K9RUV9_SPIOL; Uncharacterized protein
STRINGXP_010671685.11e-35(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G62420.12e-09basic region/leucine zipper motif 53