PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sp_028880_knhe.t1
Common NameSOVF_028880
Organism
Spinacia oleracea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
Family bZIP
Protein Properties Length: 326aa    MW: 35700.4 Da    PI: 6.4511
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sp_028880_knhe.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.64.2e-16162217358
                        XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 
                        ++kr rr+ +NRe+ArrsR+RK+a +  Le  v++L  eN++L k+l+   ++  +
  Sp_028880_knhe.t1 162 DVKRIRRMVSNRESARRSRRRKQAHLLDLEVQVEQLGVENTTLFKQLNAAAQQLRE 217
                        579*****************************************888877766554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.6E-12158216No hitNo description
SMARTSM003381.5E-16160224IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.864162225IPR004827Basic-leucine zipper domain
PfamPF001701.3E-13163214IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.23E-12164214No hitNo description
PROSITE patternPS000360167182IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    Send to blast
MNHQKPTLYA GNHHMKRSPS ELALHALVNN NPTVVDHPHH SLFYDHDHTA GFVDPTAAVV  60
SDHHHLDTFG FKNNNNQQDI INNFTVGGGF DQQALAWYQD LAPQQPCLSA TIDSQSSICA  120
GSPTSILIKP KAGDNQGSGS SEDDEEETEA GQCEQSGDDG VDVKRIRRMV SNRESARRSR  180
RRKQAHLLDL EVQVEQLGVE NTTLFKQLNA AAQQLREATT NNRVLKSDVE ALRAKVKLAE  240
DRVTRGTRNQ LLQTSTLPQI AASVQSLSGL TNMTPTIMVQ GQEASFEGVF SWQNSNDHVM  300
HRSGIGSDCT VSGGVSCVSS VNGIWR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1176183RRSRRRKQ
2178183SRRRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021843982.10.0basic leucine zipper 9 isoform X1
TrEMBLA0A0K9RU600.0A0A0K9RU60_SPIOL; Uncharacterized protein
STRINGXP_010669482.11e-130(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.13e-31basic leucine zipper 9