PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sp_032130_gizq.t1
Common NameSOVF_032130
Organism
Spinacia oleracea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
Family EIL
Protein Properties Length: 490aa    MW: 55944.7 Da    PI: 4.7435
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sp_032130_gizq.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3363.92.9e-111293482310
                        XXXXXXXXXXXXXXXXXXXXXX...XXXXX.XXXXXXX........XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
               EIN3   2 elkkrmwkdqmllkrlkerkkq.lledkeaatgakksn........ksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpv 84 
                        +lkkrmwkd +++k+lk  k   ++e  e+ +g +k           ++e++rrkkm r+QD+iLkYM+k mevc+aqGfvYgiipekgkpv
  Sp_032130_gizq.t1  29 DLKKRMWKDEVRMKKLKAVKHAsEVEGDES-IGDSKMMdddaatsvVREEKSRRKKMLRSQDAILKYMVKLMEVCKAQGFVYGIIPEKGKPV 119
                        8****************9887724555555.5444444566666669********************************************* PP

                        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S CS
               EIN3  85 egasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtG 176
                        +g+sdsLr+WW+e v+f++ +p  + +     +i++ +  ++  ++s  h+l++lqDTtlgSLLsalmqhc p qrrfple+g++pPWWPtG
  Sp_032130_gizq.t1 120 TGSSDSLRKWWRETVKFEQSAPHSLQQL--IPVIAECAALNHETSTSFLHMLQDLQDTTLGSLLSALMQHCIPAQRRFPLERGLPPPWWPTG 209
                        *******************999988766..445666666555557899******************************************** PP

                        --HHHHHHT.--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXXXX CS
               EIN3 177 kelwwgelg.lskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahsssl 267
                        +e wwg++g ls +qg+ppy+kphdlkkawkvsvL+avikhms +++++ +l+ +sk+lq km+ak+++++++v+ +ee++++ +  +   +
  Sp_032130_gizq.t1 210 DEVWWGQQGpLSVEQGPPPYRKPHDLKKAWKVSVLSAVIKHMSTDFNRMTRLVKKSKCLQAKMTAKDTATWSKVVDREEALLQ-LTNRCLRI 300
                        *******************************************************************************9774.44443333 PP

                        XXXXXXXXXXXXXXXXXX......XXXXXX.XXXXXXXXXX........XXXXXXXX CS
               EIN3 268 rkqspkvtlsceqkedve......gkkeskikhvqavktta........gfpvvrkr 310
                        +++  +  ++ +++ d                  q+ k++a        +++  +kr
  Sp_032130_gizq.t1 301 TDEGGDADVDGDEDGDEGmaqsckL--------DQN-KRKAgvfnyqetEMDKYSKR 348
                        3444444444444333332233221........111.11111122221133333333 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048731.4E-11129288No hitNo description
Gene3DG3DSA:1.10.3180.104.3E-65161292IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167686.8E-56166291IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 490 aa     Download sequence    Send to blast
MVEIYEELMD PSSGGETSES ETEELNYADL KKRMWKDEVR MKKLKAVKHA SEVEGDESIG  60
DSKMMDDDAA TSVVREEKSR RKKMLRSQDA ILKYMVKLME VCKAQGFVYG IIPEKGKPVT  120
GSSDSLRKWW RETVKFEQSA PHSLQQLIPV IAECAALNHE TSTSFLHMLQ DLQDTTLGSL  180
LSALMQHCIP AQRRFPLERG LPPPWWPTGD EVWWGQQGPL SVEQGPPPYR KPHDLKKAWK  240
VSVLSAVIKH MSTDFNRMTR LVKKSKCLQA KMTAKDTATW SKVVDREEAL LQLTNRCLRI  300
TDEGGDADVD GDEDGDEGMA QSCKLDQNKR KAGVFNYQET EMDKYSKRDH ELPCDMSPGF  360
VSAYSLLAAN YDNCHNLAVE LQIPDSSHDS TTLPPSPWSW DGHVQPSEEE AEVMSNTDDI  420
TTMQVTGEHH QTYMQCHRLN QTEYWEFDHV PQLGLDTPYR FHDHEQDMNE QAAETSIWDL  480
PYQEPNDDID
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A4e-551672904126Protein ETHYLENE INSENSITIVE 3
4zds_B4e-551672904126Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021850926.10.0ETHYLENE INSENSITIVE 3-like 5 protein
SwissprotQ9FJQ51e-111EIL5_ARATH; ETHYLENE INSENSITIVE 3-like 5 protein
TrEMBLA0A0K9RT270.0A0A0K9RT27_SPIOL; Uncharacterized protein
STRINGXP_010673484.11e-175(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65100.11e-112EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]