PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sp_053150_pjzg.t1
Common NameSOVF_053150
Organism
Spinacia oleracea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
Family bZIP
Protein Properties Length: 256aa    MW: 27720.1 Da    PI: 4.233
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sp_053150_pjzg.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.21e-14193238348
                        XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                        + +r+rr++kNRe+A rsR+RK+a++ eLe  + +Le+eN++L  e
  Sp_053150_pjzg.t1 193 AQQRQRRMIKNRESAARSRERKQAYQVELESLALKLEEENEQLLRE 238
                        679**************************************99754 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.4E-13188238No hitNo description
SMARTSM003381.0E-8191249IPR004827Basic-leucine zipper domain
PfamPF001703.9E-13193238IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.576193238IPR004827Basic-leucine zipper domain
CDDcd147075.99E-17195237No hitNo description
SuperFamilySSF579592.31E-9195238No hitNo description
PROSITE patternPS000360198213IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    Send to blast
MISDFAPANV VYADNPVESG MDTALLDAEI TLIDAAGAIS AIGAEEEETV AIRRQTGERK  60
TAEEVWREIV AGKSERKEFK VEAVDEMMTL EDFLAKAGAE MEGEVAEEVV EEDVKVGVSG  120
DLEMSDSGGL FDFDQSLVQC SYPPQPQPME AALGGVMVYG NGSGGVGGGM EVMGGVRGKR  180
RGGPIMEPLD KAAQQRQRRM IKNRESAARS RERKQAYQVE LESLALKLEE ENEQLLREKV  240
GSSTLTPPGY KRGEEG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021840660.10.0G-box-binding factor 4-like
TrEMBLA0A0K9RN730.0A0A0K9RN73_SPIOL; Uncharacterized protein
STRINGXP_010680820.11e-74(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.15e-14bZIP family protein