PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sp_071390_ugwc.t2
Common NameSOVF_071390
Organism
Spinacia oleracea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
Family bZIP
Protein Properties Length: 499aa    MW: 54603.6 Da    PI: 7.98
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sp_071390_ugwc.t2genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_125.92.2e-08177238162
                        XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                        eke +r rr   NRe+Ar   +R++a  eeL++k++ L +eN++Lk   e   ke ++l++ 
  Sp_071390_ugwc.t2 177 EKEARRIRRILANRESARQTIRRRQAFHEELTRKAADLASENETLKRSKELAVKEFQSLQTT 238
                        799*******************************************8888888888888765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF001701.3E-7177239IPR004827Basic-leucine zipper domain
SMARTSM003384.4E-8177241IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.634179242IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-5181236No hitNo description
Gene3DG3DSA:1.20.5.1701.9E-6181248No hitNo description
CDDcd147022.94E-11182233No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 499 aa     Download sequence    Send to blast
MMMSSSNNGE SSGSSASSAG GGEFEIAKVL ASLRKHDNAA AAVAVEVEVE VEKEMRGTTG  60
GGAKSTDSVG QDDNNNNNNN NNNNNNNNNS NGWGSKGKRW LSSSGGNYNK RVKECSSIHS  120
SSPLPFDLNV DQPSVYQEEC QNVDAKTEET CESAERGRVC NSPHNGGRSR HNLTEAEKEA  180
RRIRRILANR ESARQTIRRR QAFHEELTRK AADLASENET LKRSKELAVK EFQSLQTTNQ  240
NLKGQLSQTL GCKLGENKEE AQSSSPDTHN LNSANWAQLM YNKLSAGSFV FPACVSPSDL  300
NVSTLSQQLY SSRMSENTSS INGQNMPWCI LPCPVFLPIP DIKNFPSLLL KDKDEVSSVD  360
SIHAHAHAHS PSSVLHCLHN CPLVRSADKV SRGLPLTQDN CINGFHQTPF GISIAGVNQQ  420
IAPQLRDGFS VDGEDCIIPH SLNNTDTCSA TVLETPSALP EKRKERTLRK KESTVAGAEA  480
RKKRKELMKL KSRLHCHLL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1218223ETLKRS
2468484RKKESTVAGAEARKKRK
3480485RKKRKE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021861461.10.0probable basic-leucine zipper transcription factor F
TrEMBLA0A0K9RFU70.0A0A0K9RFU7_SPIOL; Uncharacterized protein
STRINGXP_010683778.11e-154(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.18e-34bZIP family protein