PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sp_082500_zhpm.t1

Common Name

SOVF_082500

Organism

Spinacia oleracea

Taxonomic ID

3562

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia

Family

Dof

Protein Properties

Length: 119aa MW: 11727.9 Da PI: 6.7662

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sp_082500_zhpm.t1	genome	TBVR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	28	4.5e-09	55	82	7	34
zf-Dof 7 kcprCdstntkfCyynnyslsqPryfCk 34 cp Cds++ + nyslsqPryfC Sp_082500_zhpm.t1 55 LCPSCDSADKQVLLSQNYSLSQPRYFCS 82 6**************************6 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	3.0E-4	53	82	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.7E-6	55	82	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 119 aa Download sequence Send to blast
LLGDGGGSGG GGAGGGGGGA GAGAGGGEDK HSEWQGQDAG GGRDDGHDNN SLPHLCPSCD 60 SADKQVLLSQ NYSLSQPRYF CSPVGAVGGT GLKVVPTVTS LLVLVAVRTN APRWRLSRI

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A0K9RCD8	2e-77	A0A0K9RCD8_SPIOL; Uncharacterized protein (Fragment)