PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sp_082670_gaee.t1
Common NameSOVF_082670
Organism
Spinacia oleracea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
Family bZIP
Protein Properties Length: 373aa    MW: 41955.1 Da    PI: 6.5195
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sp_082670_gaee.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.92.8e-10245285545
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                        kr +r   NR +A+rsR RK+++i eLe+ v +L++e +aL
  Sp_082670_gaee.t1 245 KRVKRILANRQSAQRSRVRKLQYISELERSVTALQSEVSAL 285
                        8999********************************98777 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.0E-14241305IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.772243295IPR004827Basic-leucine zipper domain
PfamPF001701.1E-9245289IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.41E-11245299No hitNo description
Gene3DG3DSA:1.20.5.1701.2E-13245297No hitNo description
CDDcd147031.63E-23246297No hitNo description
PROSITE patternPS000360248263IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 373 aa     Download sequence    Send to blast
MAQLPPKVPS IMPQNPHHCP HQEQQQQQQW QEFMRPHQQQ QQQQQQQQQQ QQQQQHQQAA  60
GQNPPWVDEF MQFSAVKRGT HRRTVSESSV AFVETGTAVP YVNGTVFRPP EITGRSKNNN  120
DDDEFDKFDD EQFMSMFSNE LGGSSSNPSS TSDHNSTNED KKKGTTRKGE EGFGGREKVE  180
DGEKAEEVES SCKFDKEQGQ VQTQANGNVN CNNKGGTGTG TDTGTGNAAD VGVADPDQQP  240
VVDPKRVKRI LANRQSAQRS RVRKLQYISE LERSVTALQS EVSALSPRVA FLDHQRMILN  300
VDNSTLKAKI AALAQDKIFK DAHQEAMKRE IERLRQVYYQ QNLNKPENIV PPPITTQSQP  360
PDTTLHKNEQ LTG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021845286.10.0basic leucine zipper 34-like isoform X1
TrEMBLA0A0K9RE900.0A0A0K9RE90_SPIOL; Uncharacterized protein
STRINGXP_010689754.11e-139(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.11e-58bZIP family protein