PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sp_086740_dfxs.t1
Common NameSOVF_086740
Organism
Spinacia oleracea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
Family bZIP
Protein Properties Length: 199aa    MW: 22663.2 Da    PI: 7.926
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sp_086740_dfxs.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_156.65.7e-18129177452
                        XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 
                        ++r +r+ kNRe+A+rsR+RK+a++ eLe +v+ L  eN+aL+k+ ++l
  Sp_086740_dfxs.t1 129 DRRHKRMVKNRESASRSRARKQAYVTELEVEVDRLRVENEALRKQQQQL 177
                        799*****************************************99988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.6E-11126190IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.047128180IPR004827Basic-leucine zipper domain
PfamPF001709.4E-16129178IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.4E-14130178No hitNo description
CDDcd147074.47E-22130177No hitNo description
SuperFamilySSF579591.31E-12130178No hitNo description
PROSITE patternPS000360133148IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009911Biological Processpositive regulation of flower development
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:2000028Biological Processregulation of photoperiodism, flowering
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0043621Molecular Functionprotein self-association
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
MEEVWNDITM NSLPNTPISH IHTIRHPPTS SGAPHFRGFI FQDFLNAGPL QNTSSIDSSP  60
PPPQPPPWQT RPAATEFQFL DNNELFNSQS HHFRLHGNSS VPTSLAPAVG QNVMNSKRCS  120
DRDEDEHVDR RHKRMVKNRE SASRSRARKQ AYVTELEVEV DRLRVENEAL RKQQQQLIED  180
PPAQLPTKHG LHRTSSAPF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021854644.11e-146protein FD-like
TrEMBLA0A0K9RCJ31e-145A0A0K9RCJ3_SPIOL; Uncharacterized protein
STRINGXP_010680407.11e-54(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35900.15e-17bZIP family protein