PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sp_130900_cgke.t1
Common NameSOVF_130900
Organism
Spinacia oleracea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
Family bZIP
Protein Properties Length: 223aa    MW: 25366.8 Da    PI: 9.7484
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sp_130900_cgke.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1444.7e-14153196548
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                        kr +rk+kNRe+A rsR+RK+a+  eL +kv  Le++N++Lkk 
  Sp_130900_cgke.t1 153 KRLKRKIKNRESAARSRARKQAYHNELVTKVSLLEEQNMRLKKD 196
                        89***************************************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1707.7E-12147196No hitNo description
SMARTSM003381.9E-9149213IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.162151196IPR004827Basic-leucine zipper domain
PfamPF001701.3E-11153196IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.19E-10153198No hitNo description
CDDcd147075.81E-14153199No hitNo description
PROSITE patternPS000360156171IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    Send to blast
MNIDEFIKND WNPEIHQPSG IKRRNDGSSI KSLQSQGSLQ LSRTASEKVV DDVWREIQQE  60
DRIKSTSSSS QGVKREPSIG EMTLEDFLAK AEAIDESALD PVMPLPLPLD MDATVRCFSQ  120
QMGLSPAPSI RGLSDTFERK RDNPGTMERG FEKRLKRKIK NRESAARSRA RKQAYHNELV  180
TKVSLLEEQN MRLKKDKELE SRLPGEVAVE PKYQLRRTSS ALL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021849469.11e-146ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLA0A0K9QZB41e-161A0A0K9QZB4_SPIOL; Uncharacterized protein
STRINGXP_010689366.12e-91(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.12e-35ABA-responsive element binding protein 3