PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sp_132190_fhmy.t1
Common NameSOVF_132190
Organism
Spinacia oleracea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
Family bZIP
Protein Properties Length: 578aa    MW: 62962.1 Da    PI: 6.7534
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sp_132190_fhmy.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.77.7e-11410468563
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                        kr++r   NR +A rs +RK  +i eLe kv++L++e ++L  +l  l+  +a l s++
  Sp_132190_fhmy.t1 410 KRAKRILANRQSAARSKERKMRYISELEHKVQTLQNEATTLSAQLTLLQRDSAGLSSQN 468
                        9*************************************************999999887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.0E-17406470IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.944408471IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.86E-11410461No hitNo description
Gene3DG3DSA:1.20.5.1703.7E-11410467No hitNo description
PfamPF001708.3E-10410468IPR004827Basic-leucine zipper domain
CDDcd147034.15E-25411462No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 578 aa     Download sequence    Send to blast
MGDTERGNID MMHRLQNPFG ALSRSSNHLD VSQLNISQIR PPLPQNSHSL QNFGSENGKR  60
SGIPPSHPPM PPLSPYSQIP VTKPGSQHSG SQNFSRGPSH SRSLSQPSFF MNDSLPPLSP  120
SPYQNSLSPT NAPDSTNTSN GSLENRDGGG NSLLPPSPFG RGNSLHITEG FPPRKLHRRS  180
VSDIPFGFDN VFQSSPPLSP MVSPGPRGGH GGLERTSSGG LAKPGQLVKK ESSWDKKRDG  240
NVEGEVVDDI LSAYMDLDNI DTMNSSGTDD KYGNENRDDL DSRASGSKTN GCESSDNEAE  300
SSVNESGSSG QRPMIGERKR GPASEVTPAT RHYRSISMDS FMGSMNFGDE SPKLPPSPST  360
GVAQLSLKDP ANGNSDSFSL EFGNGDFTGA ELKKIMANEK LAEIAITDPK RAKRILANRQ  420
SAARSKERKM RYISELEHKV QTLQNEATTL SAQLTLLQRD SAGLSSQNNE LKFRLQAMEQ  480
QAQLRDALNE ALTAEIQRLR IATGELNAES ISKCFGQQLY VNPQMYQQLQ QQQQQQQQQQ  540
QQSSQNNLNK LQQPNSLQEQ SKAEDSNNGG SSKSETNQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021848047.10.0transcription factor RF2a
TrEMBLA0A0K9QYT70.0A0A0K9QYT7_SPIOL; Uncharacterized protein
STRINGXP_010665860.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.31e-141bZIP family protein