PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sp_152130_maco.t1

Common Name

SOVF_152130

Organism

Spinacia oleracea

Taxonomic ID

3562

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia

Family

BES1

Protein Properties

Length: 163aa MW: 18192.6 Da PI: 10.1627

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sp_152130_maco.t1	genome	TBVR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	114.4	1.7e-35	35	109	2	76
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl 76 +s r p+++Er nn+ RE+rRR i+ +i+aGLR +G+yklpk+aDnn+ lkALc+eAGw ve+DG +k Sp_152130_maco.t1 35 SSLRFPSERERQNNQEREKRRRLITRRIFAGLRDHGGYKLPKHADNNDLLKALCHEAGWHVEEDGAICKKDAVTR 109 68899************************************************************9999765443 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	6.3E-31	37	108	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated

Sequence ? help Back to Top
Protein Sequence Length: 163 aa Download sequence Send to blast
MEVGMKKSNK ARGCIKTSRG PWVVRRNTKK KGVVSSLRFP SERERQNNQE REKRRRLITR 60 RIFAGLRDHG GYKLPKHADN NDLLKALCHE AGWHVEEDGA ICKKDAVTRN VGLNSEILAQ 120 VSSDGIASED QFHFNGSYGC IQESVGGGTI DLTLSLSLPA YNL

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	3e-12	58	104	392	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	3e-12	58	104	392	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	3e-12	58	104	392	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	3e-12	58	104	392	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
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Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	52	56	KRRRL

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011046810.1	3e-47	PREDICTED: protein BRASSINAZOLE-RESISTANT 2-like
TrEMBL	A0A0K9QQR4	1e-118	A0A0K9QQR4_SPIOL; Uncharacterized protein
STRING	XP_010677019.1	4e-72	(Beta vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18890.1	8e-16	BES1/BZR1 homolog 3