PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sp_156330_ptoi.t1
Common NameSOVF_156330
Organism
Spinacia oleracea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
Family bZIP
Protein Properties Length: 177aa    MW: 20066.2 Da    PI: 6.0033
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sp_156330_ptoi.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_138.52.5e-123391563
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                       ++ +r+q+NRe+ArrsR RK++ ++ L   + +  + N++L ++++  ++++ k ++e+
  Sp_156330_ptoi.t1 33 RKRKRMQSNRESARRSRMRKQQHLDDLMVQASNVRKTNHQLLNNINITSQQYLKIEAEN 91
                       6789*******************************************999999998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.3E-152993IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.1283194IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.5E-103183No hitNo description
SuperFamilySSF579594.69E-113385No hitNo description
PfamPF001701.4E-83390IPR004827Basic-leucine zipper domain
CDDcd147024.14E-203484No hitNo description
PROSITE patternPS0003603651IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    Send to blast
MASPGGITSS GTSSQQQNSS SEEDMQIQIM DERKRKRMQS NRESARRSRM RKQQHLDDLM  60
VQASNVRKTN HQLLNNINIT SQQYLKIEAE NSVLRAQMSE LSSRLQSLNE IINALNSCNN  120
NQNLGIYGGG GDEHHHEEGI FPIIPEPFTT DSFLMNPWDS ATYSNQPIMA SADMFQY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14552RRSRMRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021858370.11e-129bZIP transcription factor 11-like
TrEMBLA0A0K9QPF91e-128A0A0K9QPF9_SPIOL; Uncharacterized protein
STRINGXP_010671337.11e-107(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18160.17e-34basic leucine-zipper 2