PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sp_157290_hwof.t1
Common NameSOVF_157290
Organism
Spinacia oleracea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
Family bZIP
Protein Properties Length: 84aa    MW: 9805.14 Da    PI: 10.6891
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sp_157290_hwof.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.91.2e-092854228
                       XXXCHHHCHHHHHHHHHHHHHHHHHHH CS
             bZIP_1  2 kelkrerrkqkNReAArrsRqRKkaei 28
                        + k  rr+++NReAAr+sR+RKk ++
  Sp_157290_hwof.t1 28 TDHKTLRRLAQNREAARKSRLRKKVYT 54
                       567999******************886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.7E-72155No hitNo description
PfamPF001707.8E-73054IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.13E-53154No hitNo description
PROSITE patternPS0003603449IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 84 aa     Download sequence    Send to blast
MNKQQVLQFD TVPSTHAASH SSDRSKETDH KTLRRLAQNR EAARKSRLRK KVYTLRNAPY  60
ASEEIDVVRE QWAKCFTSKY LLLA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021858497.14e-17transcription factor TGA2 isoform X1
RefseqXP_021858498.14e-17transcription factor TGA2 isoform X2
TrEMBLA0A0K9QQR15e-55A0A0K9QQR1_SPIOL; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.56e-13TGACG motif-binding factor 6