PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sp_204130_pgzp.t1
Common NameSOVF_204130
Organism
Spinacia oleracea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
Family G2-like
Protein Properties Length: 174aa    MW: 19550.9 Da    PI: 6.5052
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sp_204130_pgzp.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like35.62e-111842226
            G2-like  2 prlrWtpeLHerFveaveqLGGsek 26
                       prlrWt +LH++Fv+ave+LGG+e+
  Sp_204130_pgzp.t1 18 PRLRWTGDLHHCFVRAVERLGGEEN 42
                       9*********************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.606.0E-101442IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    Send to blast
MMELKGRGLR PYVRSNAPRL RWTGDLHHCF VRAVERLGGE ENIINGTKMS TNVQETKIVH  60
NNSYVHDNYI PITCNSMVAS PQDVTTNFKQ DGMVQQSHHP YIVFHNLLRR SRPNLAEGYE  120
MNEEVSGYST SITITSSLSD DQHLNASLNL ELSSSCSRIM AAGIQEDVSL DLSL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019106903.17e-38PREDICTED: uncharacterized protein LOC104901034
TrEMBLA0A0K9Q9F71e-127A0A0K9Q9F7_SPIOL; Uncharacterized protein
STRINGXP_010686880.14e-37(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.12e-12G2-like family protein