PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0000s0116.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 537aa    MW: 59167.2 Da    PI: 5.2799
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0000s0116.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP226.91.2e-08163206248
                   AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaia 48 
                           +ykGVr ++  + +++eIr  ++   +k+++lg++ t  eAa+a++a
  Sphfalx0000s0116.1.p 163 QYKGVRVRPGVKGFLVEIRPRRW---KKTIWLGTYATSPEAARAYDA 206
                           69*******9999******9544...6**********88******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.2E-14162222IPR001471AP2/ERF domain
CDDcd000181.42E-11163222No hitNo description
PROSITE profilePS5103212.708163227IPR001471AP2/ERF domain
SuperFamilySSF541713.66E-9163220IPR016177DNA-binding domain
SMARTSM003802.3E-6163226IPR001471AP2/ERF domain
PfamPF008479.9E-6163206IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 537 aa     Download sequence    Send to blast
MPDHKICLTG QRTAELQEFD DLAASWGHES SVGVLRRTSS LLGDRCEFRR LSSAFLAKDF  60
DVKPSSLCTA AVIVTEASPP NALLTTSQSF PLTKKERSSL VVAEAEAIAA ADDSGSKLST  120
SSRRIAPRRR QALKAQSRAL KAVKPENVEI VAESRPRPRP SRQYKGVRVR PGVKGFLVEI  180
RPRRWKKTIW LGTYATSPEA ARAYDAGVFY TGKKTPFNFQ ESEGTFPPLP EHLSIANSDP  240
EVMDQIKWFV KEQAQKAAKR GGEEVPTQVR AVVPPQQTSN TNDKEGRSSV GLQYQCCSTL  300
FSGKEEAGEH DVKDDEDHDD GRCDPVVTPN PLQNLEPLPY NLPHCSKQGL CHNDRDFFSG  360
GMPLAVHEYM LPHASMVGDD DLLNSMQQIS CLTEQVSLSS TWRCGNEYTQ QRGEQAGFQS  420
AFGSKSDGNF SILSLDSQEV QSSGLCVWDP SIGDGLSLVN FDSCDPYAYP QAQKFPDCTF  480
AMTHPEDSFV LHQNWEGASS MSVCTDSMCL SIEESKDDHE LPVWLWPNAC GRDMVG*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12610.15e-10ERF family protein