PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0000s0273.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 445aa    MW: 49615.6 Da    PI: 4.6734
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0000s0273.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP226.41.7e-08111153747
                   AP2   7 rwdkkrgrWvAeIrdpseng....kr.krfslgkfgtaeeAakaai 47 
                           ++++ +g+WvAeIr p        k+  ++ lg++ t+e Aa+a++
  Sphfalx0000s0273.1.p 111 SFRPDQGKWVAEIRPP---HpvwiKNaSKIGLGSYPTKEAAARAYD 153
                           79************85...33443346******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103214.486106170IPR001471AP2/ERF domain
SuperFamilySSF541713.79E-8106158IPR016177DNA-binding domain
SMARTSM003801.6E-4106174IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.6E-10107167IPR001471AP2/ERF domain
PfamPF008472.1E-4109153IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 445 aa     Download sequence    Send to blast
MPDKHFCNKS FPCTYCGFGY EDPPLYPDRE KKRAKQATEQ RERRKLGERT QIRAGSRTLR  60
LEEEQLQLSN HTASTALGLS LPCSNFSKDQ DGPDTPLKRG ESSTSSWQGF SFRPDQGKWV  120
AEIRPPHPVW IKNASKIGLG SYPTKEAAAR AYDVGIYYTG KSVSVAFNIS SPAAFLPLFP  180
ANLSFDKLED VPAIREFVRK EAQKFVAMNE KAKAPSQQVS SLLEKDGDMS LEGIVSPPSS  240
MGSKLPMEDD NFDKLEDVRA IREFVQKEAQ DFVAMNEKAK APSQQVSSLL EKDGDMSLEG  300
IVSPPSSMGS KLPMEDDNFD KLEDVRAIRE FVRKEAQDFV AMNEKAKAPS QQVSSLLEKD  360
GDMSLEGIVS PRSSMGSKLP MEDDNGEPLQ ENYKLLTTAT PFFSWEWPLR NEAQVSASEE  420
DPWLESFLNS FSDLNQNCMN EEGV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67190.17e-09DREB and EAR motif protein 2