PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0000s0557.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 402aa    MW: 43562.4 Da    PI: 6.2449
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0000s0557.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.31.9e-1859109155
                   AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                           + y+GVr++  +g Wv eIr p++   + r++lg+f tae+Aa+a++aa+++l+g
  Sphfalx0000s0557.1.p  59 PVYRGVRRRT-WGVWVTEIRRPKK---KDRIWLGSFATAEMAARAYDAAALALRG 109
                           68*****877.**********854...6*************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008475.6E-1359109IPR001471AP2/ERF domain
SuperFamilySSF541714.25E-2060118IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.1E-3060118IPR001471AP2/ERF domain
PROSITE profilePS5103223.34160117IPR001471AP2/ERF domain
SMARTSM003801.0E-3260123IPR001471AP2/ERF domain
CDDcd000183.32E-1761118No hitNo description
PRINTSPR003671.2E-116172IPR001471AP2/ERF domain
PRINTSPR003671.2E-1199119IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    Send to blast
MDYMEEMLGH GEQTNQSSGH QAEALESAKS LVGTCKQTEA QMTEQMGHMS VVDTHNYVPV  60
YRGVRRRTWG VWVTEIRRPK KKDRIWLGSF ATAEMAARAY DAAALALRGP NALLNFPEYL  120
GSLPRPLDLS DKSIQAAATE AARRLAQRTG SLQRRYSRLQ ATLATSSSCA SSVTASSSSF  180
EQSRSVTSTS TRIQECSMAS QDSKGSVNVT DKKPSLNASS SSTLANMTNA AVCVVTSRSP  240
CTISANKPEE YEVTPTSSCD SELLSSGTTN KSSRGANVTL ETWKQQERRR MPAGVEEVSG  300
LENHSNFKIV GSARSSSAAA MLQEDVDQAN LGSAQKQQHN AGSSDDNLMF NMPNVIACLY  360
DHTLMCNFPG APHMLPATDV PSFSEDCDEE SAAWEPHLWS Y*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-16611171572Ethylene-responsive transcription factor ERF096
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.17e-11ERF family protein