PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0000s0687.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 219aa    MW: 24224.6 Da    PI: 10.1055
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0000s0687.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP228.73.2e-09105147247
                   AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaai 47 
                            y+G r ++  ++Wv eI+       ++++++lg++ ++eeAa+a++
  Sphfalx0000s0687.1.p 105 VYRGMRHKSEVNKWVIEIYP----TaHKRKIWLGTYKSPEEAARAYD 147
                           599***99999****66444....2235******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1014479.68E-54554No hitNo description
SuperFamilySSF541715.04E-10105150IPR016177DNA-binding domain
PROSITE profilePS5103213.485105148IPR001471AP2/ERF domain
SMARTSM003807.0E-5105174IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-13105149IPR001471AP2/ERF domain
CDDcd000181.57E-12106148No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    Send to blast
MKKTSRQGKG GVSQEGCLPW GVEGAFRQGE APNFLSLGTG TSSSPPPPPP PPPPAGRVHK  60
DLENREIDLN SPPVDQYERE TKGESCNSNS VSSLNPKFQQ QEVLVYRGMR HKSEVNKWVI  120
EIYPTAHKRK IWLGTYKSPE EAARAYDVRI HYTELAPFVK KQALTVAKRA RVEGSTTTSK  180
LPQTTTKLFP KAITIRGCFG DHFIFAYTGP NLILGYVK*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024359180.17e-26dehydration-responsive element-binding protein 1F-like
TrEMBLA0A144LHE82e-28A0A144LHE8_9BRYO; Dehydration-responsive element-binding protein 5-8
STRINGPP1S373_18V6.13e-25(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.16e-10ERF family protein