PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0001s0381.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family TCP
Protein Properties Length: 587aa    MW: 60393.5 Da    PI: 9.3949
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0001s0381.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP118.77.2e-371522763133
                   TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec...eaesssssasnsssg 88 
                           ++  +++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlq a++ai+++tgt++ +a ++    +++ss s +     
  Sphfalx0001s0381.1.p 152 KRPGSTKDRHTKVDGRGRRIRMPATCAARIFQLTRELGHKSDGETIQWLLQHAEAAIIAATGTGTVPALFStvvGPVRSSASMQPAA-- 238
                           56779**********************************************************999994443343333333333222.. PP

                   TCP  89 kaaksaakskksqksaasalnlak.esrakarar.arertrekmrik 133
                                   ++ + +  +  l +a   sra +  + a  r +e+mr +
  Sphfalx0001s0381.1.p 239 -------AGRVPLQAGS--LGFAPgTSRAPSELEmASARMQEQMRAR 276
                           .......2222222222..3333333333222221233444444433 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036349.8E-32156258IPR005333Transcription factor, TCP
PROSITE profilePS5136927.543157211IPR017887Transcription factor TCP subgroup
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0001047Molecular Functioncore promoter binding
Sequence ? help Back to Top
Protein Sequence    Length: 587 aa     Download sequence    Send to blast
MESGGHGKSK SESQRDTGQG GGSSDTGLPP QLIQQYQQAE SRGLTSYAGS SSRLEQQQQQ  60
QQQHDAGPLA QAMAAMGGQG MGRAGSSQVD MTSLAMAAGL GREYAGVEGQ SSRASMVHMS  120
GMSLARGQQQ ESSAAAAGTS AEPITAKKQA PKRPGSTKDR HTKVDGRGRR IRMPATCAAR  180
IFQLTRELGH KSDGETIQWL LQHAEAAIIA ATGTGTVPAL FSTVVGPVRS SASMQPAAAG  240
RVPLQAGSLG FAPGTSRAPS ELEMASARMQ EQMRARDTEW GISSAAEERG TDVSRSAVMG  300
VSMGALEMMG GFQAQEGLLG SRSSETGKGS VDTSRKRPRP GPLTRLKEEI EPTMALQTSP  360
TRQLSLQQAG AGAAGGSSSM QMQPAAMWAL AASAVSGVPS GMSGGMPGTV WMLPVSASSS  420
TSGVMQAGPS EQHIWSFPST AGQYRMVAPG GTPGLQLGAL GGPGGGNIMP SASMMALMPR  480
SNVQGEMGLE LQGSLMQGHH MSLAAHAGSM QLLQQPDQMR QLRAHTPAGF GLGGGTDQGQ  540
NLGMLAALAY NPNLQQNPDQ QQRSMQGSGS HLQQQGDSGD DPTGSQ*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1335339KRPRP
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00638PBMTransfer from Lj0g3v0004489Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024386490.13e-84transcription factor TCP22-like
RefseqXP_024386491.13e-84transcription factor TCP22-like
RefseqXP_024386492.13e-84transcription factor TCP22-like
STRINGPP1S67_183V6.11e-83(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58100.13e-30TCP family protein