PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0002s0384.2.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 568aa    MW: 62065.6 Da    PI: 4.5603
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0002s0384.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP226.81.3e-08175219148
                   AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaia 48 
                           ++y+GVr ++  + +++eIr  ++   +++++lg++ t  eAa+a++a
  Sphfalx0002s0384.2.p 175 PKYQGVRVRPGVKGYLVEIRPRRW---KRTIWLGTYTTSPEAARAYDA 219
                           79********9999******9544...6**********88******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.52E-12175235No hitNo description
PfamPF008471.5E-5175219IPR001471AP2/ERF domain
SMARTSM003801.1E-4176239IPR001471AP2/ERF domain
PROSITE profilePS5103212.431176240IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.8E-14176235IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-9176234IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 568 aa     Download sequence    Send to blast
MPDQKICHDG HRSVELQEFD HLAARCHGSP GLRPPSLRAD RCDLNRVSAA FLAKDFDVKS  60
VSPCAGGGVA NGVSPLSTLL NTAQSQPLAK PSSTPASAAA PVSDSAAKAS VTSLKIPPRR  120
GRPLKTVRAG PVLRVATHAA VKSLETGREV KPEPKKPKLP PQQEPVKITS DGNPPKYQGV  180
RVRPGVKGYL VEIRPRRWKR TIWLGTYTTS PEAARAYDAG IFYTGKSIAF NFQDSEGSFP  240
PLPKHLSLDN FDPDVMHEIK VFVKEKALQA ATREKVTTTQ ELPHTKKKKV ENESSSVGAE  300
EQCALSCDKT EEPCILSCDK MASVENESSP VEAEEQCDLS CDKMEEPCIL SCDKMASVEN  360
ESSPVEAEEQ CDLSCDKMEE PCILSCDKMA SVEIESSSVG AEEQYALSSA KMEEPCILFC  420
DKMASDNYED AHVKNQGDDG WDTITPNPFE NLEPLPYELP NCSDQAFWDE NFWAGIPLPV  480
HDYKSQTGMF GDEDLNNTQQ ASCLMDEVLF DQCHQEEKVV VAETGFQSVF VSKSNGDSCT  540
PNLHLWALES FDVAVQDPSQ VMDDGLS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12610.18e-10ERF family protein