PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sphfalx0004s0225.1.p

Organism

Sphagnum fallax

Taxonomic ID

53036

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum

Family

BES1

Protein Properties

Length: 388aa MW: 41144.8 Da PI: 8.6303

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sphfalx0004s0225.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	165	4.6e-51	5	102	1	97
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl.eeaeaagssasa 88 +gs+r ptwkErEnnkrRERrRRaiaaki+aGLR +Gnyklpk++DnneVlkALc+eAGw+ve+DG tyrkg++p ++++ + + Sphfalx0004s0225.1.p 5 AGSTRLPTWKERENNKRRERRRRAIAAKIFAGLRTYGNYKLPKHCDNNEVLKALCAEAGWTVEEDGRTYRKGTNPRpAVEQQMEVCTAT 93 589************************************************************************95333333333333 PP DUF822 89 spesslqss 97 p s ++ + Sphfalx0004s0225.1.p 94 GPASVISPA 102 333333322 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	1.1E-47	6	106	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005773	Cellular Component	vacuole

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence Send to blast
MTAAAGSTRL PTWKERENNK RRERRRRAIA AKIFAGLRTY GNYKLPKHCD NNEVLKALCA 60 EAGWTVEEDG RTYRKGTNPR PAVEQQMEVC TATGPASVIS PAASSYIPGA SVDGTSSLIP 120 WLKGLSASAA GTRAGGNGHG CCNSSSTATS APVTPPLSSP KLAKTSCISA ADNVKADWGA 180 AIAKDTAVGR FIIPETLYPM QQQQQQPAFS QAAAEKAELW SQYCSKSFLA AAAATNQQSQ 240 LHQVLRPAAC SSYNCETPDG CRTPAAVESD FSPRNSAAPT ALTFANNYLS SSSTSSATKS 300 WANGIRVQRT QGSSSTAADV LQEFKSAPVS GTANYVLNGS CNMQQRFIDK SSIPTSDHLL 360 YSDSTSETPY LNHPWCTCCS TTPGLQSS

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence Send to blast

MTAAAGSTRL PTWKERENNK RRERRRRAIA AKIFAGLRTY GNYKLPKHCD NNEVLKALCA  60
EAGWTVEEDG RTYRKGTNPR PAVEQQMEVC TATGPASVIS PAASSYIPGA SVDGTSSLIP  120
WLKGLSASAA GTRAGGNGHG CCNSSSTATS APVTPPLSSP KLAKTSCISA ADNVKADWGA  180
AIAKDTAVGR FIIPETLYPM QQQQQQPAFS QAAAEKAELW SQYCSKSFLA AAAATNQQSQ  240
LHQVLRPAAC SSYNCETPDG CRTPAAVESD FSPRNSAAPT ALTFANNYLS SSSTSSATKS  300
WANGIRVQRT QGSSSTAADV LQEFKSAPVS GTANYVLNGS CNMQQRFIDK SSIPTSDHLL  360
YSDSTSETPY LNHPWCTCCS TTPGLQSS

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	1e-21	9	82	372	445	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	1e-21	9	82	372	445	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	1e-21	9	82	372	445	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	1e-21	9	82	372	445	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024357987.1	1e-43	BES1/BZR1 homolog protein 4-like
Refseq	XP_024362740.1	1e-43	protein BZR1 homolog 1-like
TrEMBL	A0A2K1ITH7	2e-42	A0A2K1ITH7_PHYPA; Uncharacterized protein
TrEMBL	A9TVH7	2e-42	A9TVH7_PHYPA; Predicted protein
STRING	PP1S335_68V6.1	4e-43	(Physcomitrella patens)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	8e-27	BES1/BZR1 homolog 4

Link Out ? help Back to Top
Phytozome	Sphfalx0004s0225.1.p