PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0004s0365.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 505aa    MW: 55828.8 Da    PI: 9.7729
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0004s0365.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP231.64.2e-10336376349
                   AP2   3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaa 49 
                           ++GVr ++  g +++eIr+       + +++lg++ t+e Aa+a++aa
  Sphfalx0004s0365.1.p 336 FRGVRCRE--GVFASEIRVgG-----KNQIWLGTYKTPEAAARAHDAA 376
                           8***9654..*********33.....69******************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003805.2E-8335393IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.0E-14335379IPR001471AP2/ERF domain
PROSITE profilePS5103211.667335378IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-7336379IPR016177DNA-binding domain
PfamPF008473.5E-4336376IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 505 aa     Download sequence    Send to blast
MMRDCTYSSP GSRDYSSSQL HPASVLPRTV NRNREDDSRA TPPPRTPSMF TLTQNRDWVG  60
NARAIRRPLP ASVLPPTENR AWVDKSRPIR RPLPTYVLPP TENRASDRYN SRRTQRRSPD  120
TSLLLPSRSV RTRSAMGAGR TNQNLRTMLR RKSHSENSLT FAGTAVVEKF SVLDEVKIFD  180
KFSILTSVFK ALECLKQPSE VADEIRVASE LLSGHVAKAT EEASEVAYQV KAASDLLLDY  240
ANKKESRISY DPTGASRSFL GDSTLVPSKL SEEHVSKKRD RDCERIVGAS STGGDATIAG  300
NSKSAPPSKH YKLKKVANKS QDPEKATADM ERAKEFRGVR CREGVFASEI RVGGKNQIWL  360
GTYKTPEAAA RAHDAATFLR ATFLGGKEPE YNHKDSASSF ALSLKMEIWR PLEALKDLSL  420
TPKARNKLVI EFAQAAGKAF AAQQDENLAE TADNTERLVS VQAVDRVEDE SQQEGSAEPM  480
SPIIWTPEYV EMATAFSGSM ARED*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.12e-09ERF family protein