PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0005s0167.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 232aa    MW: 25891.5 Da    PI: 4.8281
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0005s0167.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP223.11.8e-073884452
                   AP2  4 kGVrwdkkrgr.WvAeIrd..psengkrkrfslgkfgtaeeAakaaiaarkk 52
                           GVr+ +++++ +++eIr   +     ++r++lg+f +++e  +a++aa  +
  Sphfalx0005s0167.1.p 38 EGVRYPSSQNSkYRSEIRPagW-----KQRIWLGSFESEDETMRAYDAALHA 84
                          59*****99999*****99533.....7**********99********9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103210.6923695IPR001471AP2/ERF domain
SuperFamilySSF541713.6E-73885IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.6E-93985IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    Send to blast
MPDFQTCEEL ELRRRNLPED GNNEGIQAQV ASQQTKKEGV RYPSSQNSKY RSEIRPAGWK  60
QRIWLGSFES EDETMRAYDA ALHAIGKVPV HYAYPPGYHK PILCNWKDQD LVLKHVKSIK  120
DSQFDVDAFK KEVTAKAKRA SKSCALFPLV KDVVDLVLCD LPGPLPGAMD WMVPLCEEID  180
SEDVGERALV LGIELVSEDD LAMPLHQQLP GVRSSIVAPK ENIMADGEVE C*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.18e-08ERF family protein